Macromolecule Content

Total Structure Weight: 72.21 kDa
Atom Count: 4426
Residue Count: 560
Unique protein chains: 1

6G76

Phosphorylated RSK4 N-terminal Kinase Domain in complex with AMP-PNP

DOI: 10.2210/pdb6G76/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2018-04-04 Released: 2019-04-17
Deposition Author(s): Prischi, F., Ali, M.M.
Funding Organization(s): Cancer Research UK

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.00 Å
R-Value Free: 0.268
R-Value Work: 0.222
R-Value Observed: 0.226

wwPDB Validation 3D Report Full Report

Literature

Phosphorylated RSK4 N-terminal Kinase Domain in complex with AMP-PNP

Prischi, F., Ali, M.M.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein S6 kinase alpha-6	A, B	307	Homo sapiens	Mutation(s): 0 Gene Names: RPS6KA6, RSK4 EC: 2.7.11.1
Find proteins for Q9UK32 (Homo sapiens) Explore Q9UK32 Go to UniProtKB: Q9UK32
NIH Common Fund Data Resources
PHAROS Q9UK32 GTEx ENSG00000072133
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ANP Query on ANP Download Ideal Coordinates CCD File SDF format, chain C [A] SDF format, chain D [A] SDF format, chain F [B] MOL2 format, chain C [A] MOL2 format, chain D [A] MOL2 format, chain F [B]	A, B	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C₁₀ H₁₇ N₆ O₁₂ P₃ PVKSNHVPLWYQGJ-KQYNXXCUSA-N		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain E [A] MOL2 format, chain E [A]	A	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
SEP Query on SEP	A,B	L-PEPTIDE LINKING	C₃ H₈ N O₆ P		SER

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.00 Å
R-Value Free: 0.268
R-Value Work: 0.222
R-Value Observed: 0.226
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 62.489	α = 90
b = 52.331	β = 90
c = 115.505	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Deposited Date: 2018-04-04
Released Date: 2019-04-17

Deposition Author(s):

Funding Organization	Location	Grant Number
Cancer Research UK	United Kingdom	C33269/A11161

Revision History

Version 1.0: 2019-04-17
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.