6G4C

Crystal structure of the omega transaminase from Pseudomonas jessenii in the apo form, crystallized from ammonium phosphate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.168 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A novel PLP Class II/III aminotransferase involved in caprolactam metabolism

Palacio, C.M.Rozeboom, H.J.Lanfranchi, E.Masman, M.F.Otzen, M.Janssen, D.B.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aspartate aminotransferase family protein
A, B
464Pseudomonas spMutation(s): 0 
Find proteins for A0A2D8IND4 (Pseudomonas sp)
Go to UniProtKB:  A0A2D8IND4
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.168 
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 98.296α = 90.00
b = 98.296β = 90.00
c = 119.924γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
XDSdata reduction
REFMACphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-04-10
    Type: Initial release