6FYH

Disulfide between ubiquitin G76C and the E3 HECT ligase Huwe1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.906 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.230 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

beta-Sheet Augmentation Is a Conserved Mechanism of Priming HECT E3 Ligases for Ubiquitin Ligation.

Jackl, M.Stollmaier, C.Strohaker, T.Hyz, K.Maspero, E.Polo, S.Wiesner, S.

(2018) J. Mol. Biol. 430: 3218-3233


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
E3 ubiquitin-protein ligase HUWE1
A
124Homo sapiensMutation(s): 1 
Gene Names: HUWE1 (KIAA0312, KIAA1578, UREB1)
EC: 2.3.2.26
Find proteins for Q7Z6Z7 (Homo sapiens)
Go to Gene View: HUWE1
Go to UniProtKB:  Q7Z6Z7
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin
B
76Daphnia magnaMutation(s): 0 
Find proteins for A0A162CSN9 (Daphnia magna)
Go to UniProtKB:  A0A162CSN9
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.906 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.230 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 82.234α = 90.00
b = 82.234β = 90.00
c = 85.852γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
XDSdata reduction
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Max Planck SocietyGermany--

Revision History 

  • Version 1.0: 2018-07-11
    Type: Initial release
  • Version 1.1: 2018-07-18
    Type: Data collection, Structure summary
  • Version 1.2: 2018-08-29
    Type: Data collection, Database references