6FW2

Crystal Structure of human mARC1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of human mARC1 reveals its exceptional position among eukaryotic molybdenum enzymes.

Kubitza, C.Bittner, F.Ginsel, C.Havemeyer, A.Clement, B.Scheidig, A.J.

(2018) Proc. Natl. Acad. Sci. U.S.A. 115: 11958-11963


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Mitochondrial amidoxime-reducing component 1,Endolysin,Mitochondrial amidoxime-reducing component 1
A
459Homo sapiensEnterobacteria phage T4
This entity is chimeric
Mutation(s): 0 
Gene Names: MARC1 (MOSC1), E
EC: 1.-.-.- 3.2.1.17
Find proteins for Q5VT66 (Homo sapiens)
Go to Gene View: MARC1
Go to UniProtKB:  Q5VT66
Find proteins for P00720 (Enterobacteria phage T4)
Go to UniProtKB:  P00720
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
EFK
Query on EFK

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Download CCD File 
A
oxidanyl(oxidanylidene)molybdenum
H Mo O2
VEWPYRVWJVBLDN-UHFFFAOYSA-M
 Ligand Interaction
MOO
Query on MOO

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Download CCD File 
A
MOLYBDATE ION
MOLYBDATE
Mo O4
MEFBJEMVZONFCJ-UHFFFAOYSA-N
 Ligand Interaction
B3P
Query on B3P

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Download CCD File 
A
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
C11 H26 N2 O6
HHKZCCWKTZRCCL-UHFFFAOYSA-N
 Ligand Interaction
MTE
Query on MTE

Download SDF File 
Download CCD File 
A
PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER
C10 H14 N5 O6 P S2
HPEUEJRPDGMIMY-IFQPEPLCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.78 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.169 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 61.133α = 90.00
b = 74.818β = 90.00
c = 110.726γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
Cootmodel building
MOLREPphasing
XDSdata reduction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-10-31
    Type: Initial release
  • Version 1.1: 2018-11-14
    Type: Data collection, Database references
  • Version 1.2: 2018-11-28
    Type: Data collection, Database references