6ECX

StiE O-MT residues 942-1257

  • Classification: TRANSFERASE
  • Organism(s): Stigmatella aurantiaca
  • Expression System: Escherichia coli BL21(DE3)

  • Deposited: 2018-08-08 Released: 2018-12-12 
  • Deposition Author(s): Skiba, M.A., Bivins, M.B., Smith, J.L.
  • Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease; National Institutes of Health/National Cancer Institute; National Institutes of Health/National Institute of General Medical Sciences 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.183 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Basis of Polyketide Synthase O-Methylation.

Skiba, M.A.Bivins, M.M.Schultz, J.R.Bernard, S.M.Fiers, W.D.Dan, Q.Kulkarni, S.Wipf, P.Gerwick, W.H.Sherman, D.H.Aldrich, C.C.Smith, J.L.

(2018) ACS Chem. Biol. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
StiE protein
A
319Stigmatella aurantiacaMutation(s): 0 
Gene Names: stiE
Find proteins for Q8RJY2 (Stigmatella aurantiaca)
Go to UniProtKB:  Q8RJY2
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
SAM
Query on SAM

Download SDF File 
Download CCD File 
A
S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.183 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 88.565α = 90.00
b = 88.565β = 90.00
c = 86.077γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
PDB_EXTRACTdata extraction
PHENIXrefinement
XDSdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney DiseaseUnited StatesDK042303
National Institutes of Health/National Cancer InstituteUnited StatesCA108874
National Institutes of Health/National Institute of General Medical SciencesUnited StatesGM008353

Revision History 

  • Version 1.0: 2018-12-12
    Type: Initial release