6ECW

StiD O-MT residues 956-1266

  • Classification: TRANSFERASE
  • Organism(s): Stigmatella aurantiaca
  • Expression System: Escherichia coli BL21(DE3)

  • Deposited: 2018-08-08 Released: 2018-12-12 
  • Deposition Author(s): Skiba, M.A., Bivins, M.M., Smith, J.L.
  • Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease; National Institutes of Health/National Cancer Institute; National Institutes of Health/National Institute of General Medical Sciences 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Basis of Polyketide Synthase O-Methylation.

Skiba, M.A.Bivins, M.M.Schultz, J.R.Bernard, S.M.Fiers, W.D.Dan, Q.Kulkarni, S.Wipf, P.Gerwick, W.H.Sherman, D.H.Aldrich, C.C.Smith, J.L.

(2018) ACS Chem. Biol. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
StiD protein
A, B
315Stigmatella aurantiacaMutation(s): 0 
Gene Names: stiD
Find proteins for Q8RJY3 (Stigmatella aurantiaca)
Go to UniProtKB:  Q8RJY3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAH
Query on SAH

Download SDF File 
Download CCD File 
A, B
S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.169 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 71.086α = 90.00
b = 71.086β = 90.00
c = 123.036γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
XDSdata reduction
PDB_EXTRACTdata extraction
XSCALEdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney DiseaseUnited StatesDK042303
National Institutes of Health/National Cancer InstituteUnited StatesCA108874
National Institutes of Health/National Institute of General Medical SciencesUnited StatesGM008353

Revision History 

  • Version 1.0: 2018-12-12
    Type: Initial release