6DVT

NMR structure for Sp1 transcription factor duplex 5'-d(GGGGCGGGA)

  • Classification: DNA
  • Organism(s): Homo sapiens
  • Mutation(s): No 

  • Deposited: 2018-06-25 Released: 2019-07-03 
  • Deposition Author(s): Davis, E.V., Hennig, M., Arya, D.P.
  • Funding Organization(s): National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 20 
  • Conformers Submitted: 19 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

An NMR Structure Determination and Analysis of Four Sp1 Consensus Sequences

Davis, E.V.Hennig, M.Arya, D.P.

To be published.

Macromolecules
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 1
    MoleculeChainsLengthOrganismImage
    DNA (5'-D(*GP*GP*GP*GP*CP*GP*GP*GP*A)-3')A9Homo sapiens
    Protein Feature View
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    • Reference Sequence
    • Find similar nucleic acids by:  Sequence   |   Structure
    • Entity ID: 2
      MoleculeChainsLengthOrganismImage
      DNA (5'-D(*TP*CP*CP*CP*GP*CP*CP*CP*C)-3')B9Homo sapiens
      Protein Feature View
      Expand
      • Reference Sequence
      Experimental Data & Validation

      Experimental Data

      • Method: SOLUTION NMR
      • Conformers Calculated: 20 
      • Conformers Submitted: 19 
      • Selection Criteria: structures with the lowest energy 
      • OLDERADO: 6DVT Olderado

      Structure Validation

      View Full Validation Report




      Entry History & Funding Information

      Deposition Data


      Funding OrganizationLocationGrant Number
      National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)United StatesGM097917

      Revision History  (Full details and data files)

      • Version 1.0: 2019-07-03
        Type: Initial release
      • Version 1.1: 2019-12-18
        Changes: Author supporting evidence, Data collection