6DKQ

Crystal structure of the Shr Hemoglobin Interacting Domain 2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Basis of Hemoglobin Capture by Streptococcus pyogenes

Macdonald, R.Cascio, D.Collazo, M.J.Clubb, R.T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Heme-binding protein Shr
A, B
112Streptococcus pyogenesMutation(s): 0 
Gene Names: shr
Find proteins for B0LFQ8 (Streptococcus pyogenes)
Go to UniProtKB:  B0LFQ8
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.197 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 32.470α = 90.00
b = 59.140β = 90.00
c = 102.710γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
BUSTERrefinement
XDSdata reduction
XSCALEdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesR01 AI52217
Department of Energy (United States)United StatesDE-FC02-02ER63421
National Science Foundation (United States)United StatesMCB-1716948
National Institutes of Health/National Institute of General Medical SciencesUnited StatesGM007185

Revision History 

  • Version 1.0: 2018-10-24
    Type: Initial release