6DKQ | pdb_00006dkq

Crystal structure of the Shr Hemoglobin Interacting Domain 2


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BAMP-binding_Ce6dkqB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: a+b domain in acetyl-CoA synthetase-like proteinsT: a+b domain in acetyl-CoA synthetase-like proteinsF: AMP-binding_CECOD (v294.1)
AHAP2-GCS1e6dkqA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: beta-helix of amnionless (AMN) extracellular domainT: beta-helix of amnionless (AMN) extracellular domainF: HAP2-GCS1ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF07550Heme-binding protein Shr-like, Hb-interacting domain (Shr-like_HID)Heme-binding protein Shr-like, Hb-interacting domainThe Hb-interacting domain (HID) is found duplicated in Heme-binding protein Shr from Streptococcus pyogenes, a potentially lethal human pathogen, and in one to six copies in other uncharacterised bacterial proteins. Shr is a virulence factor that cap ...The Hb-interacting domain (HID) is found duplicated in Heme-binding protein Shr from Streptococcus pyogenes, a potentially lethal human pathogen, and in one to six copies in other uncharacterised bacterial proteins. Shr is a virulence factor that captures Hb and binds to the oxidized form of heme through an N-terminal region that contains two copies of this domain. HID shows a beta-sandwich-type fold in which two antiparallel beta-sheets are flanked by an alpha-helix [1].
Domain