6CA7

Crystal structure of PCT64_13C, a strain specific anti-HIV antibody

  • Classification: IMMUNE SYSTEM
  • Expression System: Homo sapiens

  • Deposited: 2018-01-29 Released: 2018-06-27 
  • Deposition Author(s): Murrell, S., Wilson, I.A.
  • Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases; International AIDS Vaccine Initiative Neutralizing Antibody Consortium 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.643 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.169 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Co-evolution of HIV Envelope and Apex-Targeting Neutralizing Antibody Lineage Provides Benchmarks for Vaccine Design.

Rantalainen, K.Berndsen, Z.T.Murrell, S.Cao, L.Omorodion, O.Torres, J.L.Wu, M.Umotoy, J.Copps, J.Poignard, P.Landais, E.Paulson, J.C.Wilson, I.A.Ward, A.B.

(2018) Cell Rep 23: 3249-3261


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PCT64_13C light chain
L
214N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
PCT64_13C heavy chain
H
238N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
TYS
Query on TYS
H
L-PEPTIDE LINKINGC9 H11 N O6 STYR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.643 Å
  • R-Value Free: 0.190 
  • R-Value Work: 0.169 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 43.091α = 90.00
b = 68.848β = 94.27
c = 78.502γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
PHASERphasing
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesUM1 AI100663
International AIDS Vaccine Initiative Neutralizing Antibody ConsortiumUnited StatesOPP1084519

Revision History 

  • Version 1.0: 2018-06-27
    Type: Initial release
  • Version 1.1: 2019-02-20
    Type: Author supporting evidence, Data collection