6AJ9

The structure of Enterovirus D68 mature virion in complex with Fab 15C5 and 11G1

  • Classification: VIRUS
  • Organism(s): Enterovirus D68

  • Deposited: 2018-08-27 Released: 2018-11-07 
  • Deposition Author(s): Zheng, Q.B., Zhu, R., Xu, L.F., He, M.Z., Yan, X.D., Cheng, T., Li, S.W.
  • Funding Organization(s): National Natural Science Foundation of China; National Institutes of Health/National Institute of General Medical Sciences; National Institutes of Health/National Institute of Dental and Craniofacial Research; National Institutes of Health/National Institute Of Allergy and Infectious Diseases; National Institutes of Health/National Center for Research Resources; National Science Foundation (United States) 

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.5 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Atomic structures of enterovirus D68 in complex with two monoclonal antibodies define distinct mechanisms of viral neutralization

Zheng, Q.B.Zhu, R.Xu, L.F.He, M.Z.Yan, X.D.Cheng, T.Li, S.W.

(2018) Nat Microbiol --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VL of Fab 11G1
E
113N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
VH of Fab 11G1
D
122N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
VL of Fab 15C5
L
107N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
VH of Fab 15C5
H
116N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
Capsid protein VP1
A
295Enterovirus D68Mutation(s): 0 
Find proteins for A0A097F8Q2 (Enterovirus D68)
Go to UniProtKB:  A0A097F8Q2
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
Capsid protein VP2
B
248Enterovirus D68Mutation(s): 0 
Find proteins for A0A0A7X639 (Enterovirus D68)
Go to UniProtKB:  A0A0A7X639
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Capsid protein VP3
C
247N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.5 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina81401669
National Institutes of Health/National Institute of General Medical SciencesUnited StatesR37-GM33050
National Institutes of Health/National Institute of General Medical SciencesUnited StatesGM071940
National Institutes of Health/National Institute of General Medical SciencesUnited States1U24GM116792
National Institutes of Health/National Institute of Dental and Craniofacial ResearchUnited StatesDE025567
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesAI094386
National Institutes of Health/National Center for Research ResourcesUnited States1S10RR23057
National Science Foundation (United States)United StatesDBI-1338135
National Science Foundation (United States)United StatesDMR-1548924
National Science Foundation (United States)United StatesDBI-1338135
National Science Foundation (United States)United StatesDMR-1548924

Revision History 

  • Version 1.0: 2018-11-07
    Type: Initial release