6A10

Crystal structure of hen egg white lysozyme crystallized by ammonium sulfate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.13 Å
  • R-Value Free: 0.176 
  • R-Value Work: 0.163 

wwPDB Validation 3D Report Full Report


This is version 2.1 of the entry. See complete history

Literature

Anisotropic Distribution of Ammonium Sulfate Ions in Protein Crystallization

Kitahara, M.Fudo, S.Yoneda, T.Nukaga, M.Hoshino, T.

(2019) Cryst.Growth Des. 19: 6004-6010


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Lysozyme C
A, B, C
129Gallus gallusMutation(s): 0 
Gene Names: LYZ
EC: 3.2.1.17
Find proteins for P00698 (Gallus gallus)
Go to Gene View: LYZ
Go to UniProtKB:  P00698
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B, C
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.13 Å
  • R-Value Free: 0.176 
  • R-Value Work: 0.163 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 41.399α = 115.97
b = 57.971β = 105.20
c = 57.618γ = 98.81
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
PHENIXrefinement
HKL-2000data reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Japan Society for the Promotion of ScienceJapan15K08458

Revision History 

  • Version 1.0: 2019-02-20
    Type: Initial release
  • Version 2.0: 2019-07-24
    Type: Atomic model, Data collection, Derived calculations
  • Version 2.1: 2019-11-20
    Type: Database references