Download Mendeleyhuman catechol O-methyltransferase in complex with SAM and DNC at 1.50A
Lerner, C., Rudolph, M.G.To be published.
5LSA
human catechol O-methyltransferase in complex with SAM and DNC at 1.50A
- PDB DOI: https://doi.org/10.2210/pdb5LSA/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2016-08-24 Released: 2016-09-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.210
- R-Value Work: 0.167
- R-Value Observed: 0.169
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Catechol O-methyltransferase | 221 | Homo sapiens | Mutation(s): 0 Gene Names: COMT EC: 2.1.1.6 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P21964 (Homo sapiens) Explore P21964 Go to UniProtKB: P21964 | |||||
PHAROS: P21964 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P21964 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SAM Query on SAM | D [auth A] | S-ADENOSYLMETHIONINE C15 H22 N6 O5 S MEFKEPWMEQBLKI-FCKMPRQPSA-N |  | Ligand Interaction | |
| DNC Query on DNC | E [auth A] | 3,5-DINITROCATECHOL C6 H4 N2 O6 VDCDWNDTNSWDFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
| CL Query on CL | C [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 Å
- R-Value Free: 0.210
- R-Value Work: 0.167
- R-Value Observed: 0.169
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.021 | α = 90 |
| b = 61.311 | β = 118.3 |
| c = 44.773 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2016-09-07 Deposition Author(s): Ehler, A., Lerner, C., Rudolph, M.G.
Revision History (Full details and data files)
- Version 1.0: 2016-09-07
Type: Initial release
