5D5G

Structure of colocasia esculenta agglutinin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.74 Å
  • R-Value Free: 0.427 
  • R-Value Work: 0.344 
  • R-Value Observed: 0.345 

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This is version 1.1 of the entry. See complete history


Literature

Crystal structure Colocasia esculenta tuber agglutinin at 1.74A resolution and its quaternary interactions

Chattopadhyaya, R.Biswas, H.Sarkar, A.

(2017) J Glycobiol 6: 1000126-1000126


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Tuber agglutinin AC109Colocasia esculentaMutation(s): 0 
Gene Names: CEA
Find proteins for R9RL27 (Colocasia esculenta)
Explore R9RL27 
Go to UniProtKB:  R9RL27
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Tuber agglutinin BD111Colocasia esculentaMutation(s): 0 
Gene Names: CEA
Find proteins for R9RL27 (Colocasia esculenta)
Explore R9RL27 
Go to UniProtKB:  R9RL27
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.74 Å
  • R-Value Free: 0.427 
  • R-Value Work: 0.344 
  • R-Value Observed: 0.345 
  • Space Group: P 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 122.012α = 90
b = 47.198β = 90
c = 82.251γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PDB_EXTRACTdata extraction
d*TREKdata reduction
d*TREKdata scaling
MOLREPphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Science and TechnologyIndianone

Revision History  (Full details and data files)

  • Version 1.0: 2015-09-02
    Type: Initial release
  • Version 1.1: 2017-08-30
    Changes: Database references