5CYP

GTPase domain of Septin 9 in complex with GTP-gamma-S


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.893 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.252 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

GTPase domain of Septin 9 in complex with GTP-gamma-S

Matos, S.S.Leonardo, D.A.Pereira, H.M.Horjales, E.Araujo, A.P.U.Garratt, R.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Septin-9
A, B, C, D
274Homo sapiensMutation(s): 0 
Gene Names: SEPT9 (KIAA0991, MSF)
Find proteins for Q9UHD8 (Homo sapiens)
Go to Gene View: SEPT9
Go to UniProtKB:  Q9UHD8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A, B, C, D
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
GSP
Query on GSP

Download SDF File 
Download CCD File 
A, B, C, D
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
C10 H16 N5 O13 P3 S
XOFLBQFBSOEHOG-UUOKFMHZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.893 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.252 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 74.587α = 90.00
b = 79.156β = 100.38
c = 108.217γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
PDB_EXTRACTdata extraction
MOSFLMdata reduction
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
FAPESPBrazil2014/15546-1

Revision History 

  • Version 1.0: 2016-08-03
    Type: Initial release
  • Version 1.1: 2017-09-27
    Type: Author supporting evidence, Derived calculations, Refinement description
  • Version 1.2: 2017-11-01
    Type: Author supporting evidence