5ZTO

Crystal structure of EGFR 696-1022 T790M/C797S in complex with D3003


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.649 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.231 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of EGFR 696-1022 T790M/C797S in complex with D3003

Zhu, S.J.Yun, C.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Epidermal growth factor receptor
A
331Homo sapiensMutation(s): 2 
Gene Names: EGFR (ERBB, ERBB1, HER1)
EC: 2.7.10.1
Find proteins for P00533 (Homo sapiens)
Go to Gene View: EGFR
Go to UniProtKB:  P00533
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
9JO
Query on 9JO

Download SDF File 
Download CCD File 
A
N-{trans-4-[3-(2-chlorophenyl)-7-{[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino}-2-oxo-3,4-dihydropyrimido[4,5-d]pyrimidin-1(2H)-yl]cyclohexyl}propanamide
C33 H41 Cl N8 O2
WVLWGBZNXIVAKC-YOCNBXQISA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.649 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.231 
  • Space Group: I 2 3
Unit Cell:
Length (Å)Angle (°)
a = 148.731α = 90.00
b = 148.731β = 90.00
c = 148.731γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data reduction
PHENIXrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-05-04 
  • Released Date: 2019-06-12 
  • Deposition Author(s): Zhu, S.J., Yun, C.H.

Revision History 

  • Version 1.0: 2019-06-12
    Type: Initial release