Biological Assembly 1  

 3D View: Structure

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Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 3-mer - A2B 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: authors reported there is no experimental evidence

Macromolecule Content

• Total Structure Weight: 33923.72 
• Atom Count: 2144 
• Residue Count: 302 
• Unique protein chains: 3

5YMY

The structure of the complex between Rpn13 and K48-diUb

• DOI: 10.2210/pdb5YMY/pdb

• Classification: PROTEIN BINDING/SIGNALING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): 1 


• Deposited: 2017-10-22 Released: 2019-03-13 
• Deposition Author(s): Liu, Z., Dong, X., Gong, Z., Yi, H.W., Liu, K., Yang, J., Zhang, W.P., Tang, C.
• Funding Organization(s): Ministry of Science and Technology (China); National Basic Research Program of China(973 Program); National Natural Science Foundation of China 

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 240 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.

Liu, Z., Dong, X., Yi, H.W., Yang, J., Gong, Z., Wang, Y., Liu, K., Zhang, W.P., Tang, C.

(2019) Cell Discov 5: 19-19

• PubMed: 30962947 
• DOI: 10.1038/s41421-019-0089-7


• PubMed Abstract: 
  

The interaction between K48-linked ubiquitin (Ub) chain and Rpn13 is important for proteasomal degradation of ubiquitinated substrate proteins. Only the complex structure between the N-terminal domain of Rpn13 (Rpn13 ^NTD ) and Ub monomer has been characterized, while it remains unclear how Rpn13 specifically recognizes K48-linked Ub chain. Using single-molecule FRET, here we show that K48-linked diubiquitin (K48-diUb) fluctuates among distinct conformational states, and a preexisting compact state is selectively enriched by Rpn13 ^NTD . The same binding mode is observed for full-length Rpn13 and longer K48-linked Ub chain. Using solution NMR spectroscopy, we have determined the complex structure between Rpn13 ^NTD and K48-diUb. In this structure, Rpn13 ^NTD simultaneously interacts with proximal and distal Ub subunits of K48-diUb that remain associated in the complex, thus corroborating smFRET findings. The proximal Ub interacts with Rpn13 ^NTD similarly as the Ub monomer in the known Rpn13 ^NTD :Ub structure, while the distal Ub binds to a largely electrostatic surface of Rpn13 ^NTD . Thus, a charge-reversal mutation in Rpn13 ^NTD weakens the interaction between Rpn13 and K48-linked Ub chain, causing accumulation of ubiquitinated proteins. Moreover, physical blockage of the access of the distal Ub to Rpn13 ^NTD with a proximity-attached Ub monomer can disrupt the interaction between Rpn13 and K48-diUb. Taken together, the bivalent interaction of K48-linked Ub chain with Rpn13 provides the structural basis for Rpn13 linkage selectivity, which opens a new window for modulating proteasomal function.

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Organizational Affiliation: 

Sunnybrook Research Institute, Toronto, ON, M4N 3M5, Canada. [e-mail].,Rega Institute for Medical Research and Department of Microbiology and Immunology, KU Leuven, Leuven, 3000, Belgium.,Université Grenoble Alpes, CNRS, CEA, IBS UMR 5075, 38044, Grenoble, France. [e-mail].,Department of Drug Metabolism and Pharmacokinetics, Genentech, South San Francisco, CA, USA.,Structural Studies Division, MRC-LMB, Francis Crick Avenue, Cambridge, CB2 0QH, UK.,Experimental Retrovirology Section, HIV and AIDS Malignancy Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, 20892, USA.,Department of Chemistry and Biochemistry, University of California Los Angeles, Los Angeles, CA 90095, USA.,Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, IL 60607, USA.,Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, 3800, Australia. [e-mail].,Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA, USA. [e-mail].,National Cancer Institute-RAS Initiative, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Frederick, MD 21702, USA.,Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA, USA. [e-mail].,Chemistry, University of Kansas, Lawrence, Kansas 66045.,David Geffen School of Medicine, University of California Los Angeles and Greater West Los Angeles Health Care System, Los Angeles, CA 90095, USA.,Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.,Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA. [e-mail].,Laboratoire de Chimie Biophysique, ISIS, Universite de Strasbourg, 67000, Strasbourg, France.,Department of Infectious Diseases, Genentech, South San Francisco, CA, USA. [e-mail].,Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, CA, 91125, USA.,Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.,From the Departments of Biological Chemistry and Chemistry and Biochemistry, Howard Hughes Medical Institute, UCLA-DOE Institute, UCLA, Los Angeles, California 90095 and.,Pharmacy & Pharmacology, University of Bath, Claverton Down, Bath, BA2 7AY, United Kingdom.,Gene Center Munich and Department of Biochemistry, Ludwig Maximilian University of Munich, 81377 Munich, Germany; Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA. Electronic address: [e-mail].,Biocruces-Bizkaia Health Research Institute , Ikerbasque, Basque Foundation for Science , Bilbao 48011 , Spain.,Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, 599-8531, Japan.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720; [e-mail] [e-mail].,Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA.,Chemical Genomics Centre of the Max Planck Society , Otto-Hahn-Str. 15, 44227 Dortmund, Germany.,Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.,Veterans Affairs Hospital, Nashville, TN, 37232, USA.,Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC, V5A 1S6, Canada.,Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10027, USA; Department of Systems Biology, Zukerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.,Hamburg Centre for Ultrafast Imaging, Institute of Nanostructure and Solid State Physics, Universität Hamburg, CFEL, Luruper Chaussee 149, 22761, Hamburg, Germany. [e-mail].,Department of Biomedical Engineering, Institute of Complex Molecular Systems, Eindhoven University of Technology , Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.,School of Biological Sciences , Nanyang Technological University , 50 Nanyang Drive , Singapore 637551.,Structural Molecular Biology Group, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.,Medizinische Physik und Biophysik, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany.,Leadership Alliance, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA.,Division of Infection and Immunity, Cardiff University School of Medicine, Cardiff, Wales, United Kingdom.,Molecular Sciences Institute, School of Chemistry, University of the Witwatersrand, Johannesburg 2000, South Africa.,Infection and Immunity Program, Biomedicine Discovery Institute and Department of Biochemistry & Molecular Biology, Monash University, Clayton, Australia.,Gene Center Munich and Department of Biochemistry, Ludwig Maximilian University of Munich, 81377 Munich, Germany; Department of Physical Chemistry, Rudjer Boskovic Institute, 10000 Zagreb, Croatia.,IAVI Neutralizing Antibody Center and Collaboration of AIDS Vaccine Discovery, The Scripps Research Institute, La Jolla, CA 92037, USA.,Centre Hospitalier Universitaire de Québec Research Center, Université Laval, Québec City, QC, G1V 4G2, Canada.,Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA, USA.,Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China; University of Chinese Academy of Sciences, Beijing, China.,Structural Biology Programs, Sloan Kettering Institute, New York, New York 10065.,Department of Chemistry and Chemical Biology , Harvard University , 12 Oxford Street , Cambridge , Massachusetts 02138 , United States.,James Cook University, Cairns, Australia.,Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille Université, Campus de Luminy, Case 932, 13288, Marseille Cedex 09, France.,Department of Molecular Biology, Faculty of Biology, Riga, Latvia.,Department of Biological Sciences , National University of Singapore , 14 Science Drive 4 , Singapore 117543.,Université Paris Descartes, Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques UMR 8601 CNRS, Sorbonne Paris Cité (USPC), Paris, 75006, France.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA; IAVI Neutralizing Antibody Center and Collaboration of AIDS Vaccine Discovery, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: [e-mail].,INSERM U1054, Montpellier, France.,Department of Biochemistry & Molecular Biology , Colorado State University , Fort Collins , Colorado 80523 , United States.,Department of Chemistry & Pharmaceutical Sciences, VU University Amsterdam , De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands.,Howard Hughes Medical Institute, University of Washington, Seattle, Washington, 98195.,DuPont Nutrition and Health, BP 10, 86220, Dangé-Saint-Romain, France.,Institute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest, Hungary.,Department of Physiology, Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin.,Institut de Chimie des Substances Naturelles, CNRS UPR 2301, Université Paris-Saclay, LabEx LERMIT , 1 avenue de la Terrasse, Bât. 27 , 91198 Gif-sur-Yvette , France.,School of Life Science and Technology, ShanghaiTech University, Shanghai, China.,Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA, USA.,Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan.,Department of Pathology, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, China.,ARC Centre of Excellence in Advanced Molecular Imaging, Monash University, Clayton, Victoria, 3800, Australia. [e-mail].,Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA, USA.,Department of Cell Biology, Neurobiology and Anatomy and.,Department of Chemistry, Center for Integrated Protein Science Munich (CIPSM), Technische Universität München, Garching, Germany.,Medizinische Biochemie und Molekularbiologie, Universität des Saarlandes, Kirrberger Str., Geb. 44, D-66421 Homburg, Germany. [e-mail].,Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif-sur-Yvette, France [e-mail].,MOH key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.,Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA 02115, USA.,Department of Biochemical and Cellular Pharmacology, Genentech, South San Francisco, CA, USA. [e-mail].,Faculdade de Ciências, Departamento de Biologia, Universidade do Porto, Porto, Portugal.,Département de biochimie, de microbiologie, et de bioinformatique, Faculté des sciences et de génie, Groupe de recherche en écologie buccale, Faculté de médecine dentaire, Université Laval, Québec City, QC, G1V 0A6, Canada.,EA7361 "Structure, dynamic, function and expression of broad spectrum β-lactamases" , Université Paris Sud, Université Paris Saclay, LabEx LERMIT, Faculty of Medicine , 78 rue du Général Leclerc , 94275 Le Kremlin-Bicêtre , France.,Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.,RQx Pharmaceuticals, La Jolla, CA, USA.,Latvian Biomedical Research and Study Centre, Riga, Latvia.,Institute of Biochemistry, Center for Structural and Cell Biology in Medicine, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany; German Center for Infection Research (DZIF), Hamburg - Lübeck - Borstel - Riems Site, University of Lübeck, Germany. Electronic address: [e-mail].,Department of Biochemistry and Biophysics, Arrhenius Laboratories for Natural Sciences, Stockholm University, Stockholm, Sweden. [e-mail].,Key Laboratory of Infection and Immunity, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China. [e-mail].,1Princess Margaret Cancer Centre, Toronto, M5G 1L7 ON Canada.,Infection and Immunity Research Laboratory, Metabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.,Department of Chemistry & Nano Science, Ewha Womans University, Seoul, 03760, Republic of Korea. Electronic address: [e-mail].,Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, The University of Melbourne, Melbourne, VIC 3052, Australia. Electronic address: [e-mail].,Division of Computational Biology, School of Life Sciences, University of Dundee, Dundee DD1 5HE, UK.,Department of Biochemistry & Biophysics , Oregon State University , Corvallis , Oregon 97333 , United States.,Biochemistry Department, Oxford University, South Parks Road, Oxford, OX1 1HY, UK. [e-mail].,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA; IAVI Neutralizing Antibody Center and Collaboration of AIDS Vaccine Discovery, The Scripps Research Institute, La Jolla, CA 92037, USA.,Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA.,WM Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.,From the Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Hokkaido 060-8628, Japan.,Department of Translational Immunology, Genentech, South San Francisco, CA, USA.,Department of Biomedical Informatics and Health Education, University of Washington, Seattle, Washington, 98195.,Department of Immunology and Microbial Sciences, The Scripps Research Institute, La Jolla, CA 92037, USA.,Department of Infectious Diseases, Genentech, South San Francisco, CA, USA. [e-mail].,RIKEN Program for Drug Discovery and Medical Technology Platforms , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan.,Department of Chemistry, State University of New York at Buffalo, Buffalo, New York, 14260.,the Department of Biology, Technion-Israel Institute of Technology, Haifa 3200003, Israel.,Institut de Biologie Structurale (IBS), CEA, CNRS, Université Grenoble Alpes, Grenoble, France.,Department of Biochemistry and Molecular Biology , Michigan State University , East Lansing , Michigan 48824 , United States.,Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. [e-mail].,Department of Chemistry, Center for Integrated Protein Science Munich (CIPSM), Technische Universität München, Lichtenbergstraße 4, 85747, Garching, Germany.,Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA. Electronic address: [e-mail].,CryoEM Shared Resources, Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA. [e-mail].,Farncombe Family Digestive Health Research Institute, McMaster University. Department of Medicine, Faculty of Health Sciences, McMaster University, Hamilton, ON, L8S 4K1, Canada.,Institute of Pharmaceutical Chemistry, Goethe-University Frankfurt, Max von Lauestr. 9, 60438 Frankfurt am Main, Germany; Buchmann Institute for Life Sciences (BMLS) and Structural Genomics Consortium Goethe-University Frankfurt, Max von Lauestr. 9, 60438 Frankfurt am Main, Germany.,Department of Molecular Engineering, Amgen Inc., Cambridge, MA, United States of America.,Mass Spectrometry for Quantitative Proteomics, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.,Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada.,Environmental Genomics and Systems Biology and Molecular Biophysics and Integrative Bioimaging Divisions , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States.,Hospital for Sick Children, Toronto, Ontario, Canada. [e-mail].,Department of Biological Sciences, The University of Alabama in Huntsville, Huntsville, Alabama.,Retrovirox, San Diego, CA, USA.,California Institute for Quantitative Biosciences, University of California, Berkeley, United States.,2National Key Laboratory of Crop Genetic Improvement, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070 China.,4Department of Pharmacology, Institute of Neuroscience, Key Laboratory of Medical Neurobiology of Ministry of Health of China, and Zhejiang Province Key Laboratory of Mental Disorder's Management, Zhejiang University School of Medicine, Hangzhou, Zhejiang Province 310027 China.,Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: [e-mail].,National Research Laboratory of Molecular Microbiology and Toxicology, Department of Agricultural Biotechnology, and Center for Food Safety and Toxicology, Seoul National University, Seoul, South Korea.,From the Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Hokkaido 060-8628, Japan, [e-mail].,Biochemistry Department, Oxford University, South Parks Road, Oxford, OX1 1HY, UK.,Department of Infection and Immunity, Luxembourg Institute of Health, Esch-sur-Alzette, Luxembourg.,Hefei National Laboratory for Physical Science at the Microscale, School of Life Sciences, University of Science and Technology of China, 96 Jinzhai Road, Hefei, Anhui 230027, China.,Sunnybrook Research Institute, Toronto, ON, M4N 3M5, Canada.,Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee DD1 5HE, UK. Electronic address: [e-mail].,3University of Chinese Academy of Sciences, Beijing, 100049 China.,Institut for Advanced Biosciences, UMR InsermU1209/CNRS5309/UGA, University of Grenoble Alpes, Grenoble, France.,From the Graduate School of Chemical Sciences and Engineering, Hokkaido University, Sapporo, Hokkaido 060-8628, Japan, [e-mail].,College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, 712100, China; LBPA, ENS de Cachan, Université Paris-Saclay, Centre National de la Recherche Scientifique, 61 Avenue du Président Wilson, 94235, Cachan, France. Electronic address: [e-mail].,ARC Centre of Excellence in Advanced Molecular Imaging, Monash University, Clayton, Victoria, 3800, Australia. [e-mail].,Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, 99352.,Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720.,4Department of Medical Biophysics, University of Toronto, Toronto, M5G 1L7 ON Canada.,UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, Los Angeles, CA, USA. [e-mail].,Laboratory of Structure and Function of Biomolecules, Institute of Biotechnology of the Czech Academy of Sciences, v.v.i., Biocev, Vestec, Czech Republic.,1CAS Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic Molecular Physics, National Center for Magnetic Resonance at Wuhan, Wuhan Institute of Physics and Mathematics of the Chinese Academy of Sciences, Wuhan, Hubei Province 430071 China.,Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Fife, KY16 9ST, UK.,Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. [e-mail].,Research Faculty of Agriculture, Hokkaido University, N-9, W-9, Sapporo 060-8589, Japan.,University of Bath, Building 4 South, Department of Biology and Biochemistry, Claverton Down, Bath, BA2 7AY, United Kingdom.,Dipartimento di Bioscienze, Università degli Studi di Milano, 20133, Milano, Italy. [e-mail].,Molecular Biophysics and Integrative Bio-Imaging Division, Lawrence Berkeley National Laboratory, Berkeley, United States.,Infection and Immunity Research Laboratory, Metabolic Regulation Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea [e-mail] [e-mail].,Center for Advanced Biotechnology and Medicine, and Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, New Jersey, 08854.,Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109, USA.,Department of Chemical and Physical Biology, Vanderbilt University, Nashville, Tennessee.,Department of Immunology and Microbial Sciences, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: [e-mail].,York Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York YO10 5DD, UK.,Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK.,Department of Chemistry, Sejong University, Seoul, South Korea.,Department of Structural Biology, Stanford University School of Medicine, Stanford, CA, USA. [e-mail].,Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, The University of Melbourne, Melbourne, VIC 3052, Australia.,Institut für Pharmazeutische und Medizinische Chemie, PharmaCampus, Westfälische Wilhelms-Universität Münster, Corrensstraße 48, D-48149 Münster, Germany. [e-mail].,Department of Protein Technologies, Amgen Inc., South San Francisco, CA, United States of America.,Department of Biochemical and Cellular Pharmacology, Genentech, South San Francisco, CA, USA.,Institute of Mathematical Problems of Biology, RAS, Branch of Keldysh Institute of Applied Mathematics of the Russian Academy of Sciences, Professor Vitkevich St., Pushchino, 142290, Russian Federation. [e-mail].,National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg 2131, South Africa; Faculty of Health Sciences, University of the Witwatersrand, Johannesburg 2000, South Africa; Centre for the AIDS Programme of Research in South Africa (CAPRISA), University of KwaZulu Natal, Durban 4041, South Africa. Electronic address: [e-mail].,DuPont Nutrition and Health, 3329 Agriculture Dr, Madison, WI, 53716, USA.,Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA.,Howard Hughes Medical Institute, University of California, Berkeley, CA 94720.,Wolfson Drug Discovery Unit, Centre for Amyloidosis and Acute Phase Proteins, University College London, London, NW3 2PF, UK.,Northeastern Collaborative Access Team, Argonne National Laboratory, Lemont, IL, 60439, USA.,School of Molecular Biosciences, Washington State University, Pullman, Washington, 99164.,Department of Chemistry, University of Illinois at Chicago, Chicago, IL 60607, USA.,Félix d'Hérelle Reference Center for Bacterial Viruses, Faculté de médecine dentaire, Université Laval, Québec City, QC, G1V 0A6, Canada. [e-mail].,Dynamique des Interactions Membranaires Normales et Pathologiques, UMR 5235, CNRS, Université de Montpellier, Montpellier, France.,Structural Biology and Bioinformatics Division, Council of Scientific and Industrial Research - Indian Institute of Chemical Biology, Kolkata, India [e-mail].,From the Departments of Biological Chemistry and Chemistry and Biochemistry, Howard Hughes Medical Institute, UCLA-DOE Institute, UCLA, Los Angeles, California 90095 and [e-mail].,Doctoral School of Multidisciplinary Medical Science, University of Szeged, Szeged, Hungary.,NBICS Center, National Research Centre "Kurchatov Institute", Akad. Kurchatova sqr, 1, Moscow, 123182, Russian Federation.,Institute for Protein Design, University of Washington, Seattle, Washington, 98195.,Department of Structural Biology, Genentech, South San Francisco, CA, USA.,Department of Biochemistry and Molecular Biology and the Center for Blood Research, University of British Columbia, Vancouver, BC, Canada.,Department of Biochemistry and Molecular Biology and the Center for Blood Research, University of British Columbia, Vancouver, BC, Canada. [e-mail].,The Pirbright Institute, Pirbright, Woking, United Kingdom.,Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada. [e-mail].,The Centre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Richardson Road, Newcastle upon Tyne, NE2 4AX, UK.,Bacteriology-Hygiene Unit , Assistance Publique/Hôpitaux de Paris, Bicêtre Hospital , 78 rue du Général Leclerc , 94275 Le Kremlin-Bicêtre , France.,Pharmaron Beijing Company, Ltd. , Taihe Road , BDA, Beijing 100176 , PR China.,Université Grenoble Alpes, CNRS, CEA, IBS UMR 5075, 38044, Grenoble, France.,Department of Genetics, Harvard Medical School, Boston, Massachusetts.,Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique (CNRS), Campus de Luminy, Case 932, 13288, Marseille Cedex 09, France.,ConfometRx, Santa Clara, CA, USA.,National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg 2131, South Africa.,Centro di Ricerca Pediatrica Romeo ed Enrica Invernizzi, Università degli Studi di Milano, 20133, Milano, Italy.,Department of Biochemistry, University of California, Irvine, CA 92697.,National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg 2131, South Africa; Faculty of Health Sciences, University of the Witwatersrand, Johannesburg 2000, South Africa.,the Department of Medicine, University of California San Diego, La Jolla, California 92037, and.,Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.,Clinical Research Center for Allergy and Rheumatology, Sagamihara National Hospital, 18-1 Sakuradai, Minami-ku, Sagamihara, 252-0392, Japan.,National Center for Global Health and Medicine Research Institute, Tokyo, 162-8655, Japan. [e-mail].,Research Faculty of Agriculture, Hokkaido University, N-9, W-9, Sapporo 060-8589, Japan. Electronic address: [e-mail].,Early Product Development , Pharmaceutical Sciences, IMED Biotech Unit, AstraZeneca , Gothenburg , SE-43183 Mölndal , Sweden.,From the Molecular Biology and.,School of Veterinary Sciences, University of Bristol, Bristol, United Kingdom.,Department of Global Health, University of Washington, Seattle, Washington, 98165.,Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium.,Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague, Czech Republic.,MSU-DOE Plant Research Laboratory , Michigan State University , East Lansing , Michigan 48824 , United States.,Marine Biotechnology Research Center, Korea Institute of Ocean Science and Technology, Ansan 426-744, Republic of Korea.,Institute for Research in Biomedicine, The Barcelona Institute of Science and Technology, Carrer de Baldiri Reixac 10, 08028, Barcelona, Spain.,Institute of Microbiology & Infection and School of Biosciences, University of Birmingham, Edgbaston, Birmingham , B15 2TT, UK.,Department of Biochemistry, Vanderbilt University, Nashville, TN, 37232-2372, USA.,Molecular and Cell Biology Graduate Program, University of California, Berkeley, CA 94720.,UMR Ecologie Microbienne, CNRS, INRA, VetAgro Sup, UCBL, Université de Lyon, F-69622 Villeurbanne, Lyon, France.,Dynamique des Interactions Membranaires Normales et Pathologiques, UMR 5235, CNRS, Université de Montpellier, Montpellier, France. [e-mail].,Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, 3800, Australia. [e-mail].,Chemistry Research Laboratory, University of Oxford, Oxford, UK, [e-mail].,Department of Chemistry, University of Duisburg-Essen , Universitätstr. 7, 45141 Essen, Germany.,Center for Structural Biology, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA.,Institute of Pharmaceutical Chemistry, Goethe-University Frankfurt, Max von Lauestr. 9, 60438 Frankfurt am Main, Germany; Buchmann Institute for Life Sciences (BMLS) and Structural Genomics Consortium Goethe-University Frankfurt, Max von Lauestr. 9, 60438 Frankfurt am Main, Germany; German Cancer Network (DKTK), Frankfurt Site, 60438 Frankfurt am Main, Germany.,Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, The University of Melbourne, Melbourne, VIC 3052, Australia. Electronic address: [e-mail].,Department of Infectious Diseases, Genentech, South San Francisco, CA, USA.,Medizinische Physik und Biophysik, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany; Max-Planck-Institut für Molekulare Genetik, Microscopy and Cryo-Electron Microscopy Group, Ihnestraße 63-73, 14195 Berlin, Germany.,Research Complex at Harwell (RCaH), Rutherford Appleton Laboratory, Harwell Science and Innovation Campus, Didcot, Oxford, OX11 OFA, UK.,Program in Chemical Biology , University of Michigan , Ann Arbor , Michigan 48109 , United States.,From the State Key Laboratory of Cellular Stress Biology, Innovation Center for Cell Signaling Network, School of Life Sciences, Xiamen University, Fujian 361005, China.,Department of Molecular and Cellular Physiology, Stanford University School of Medicine, Stanford, CA, USA. [e-mail].,Institut de Biologie Structurale, CNRS, CEA, UGA, 30044, Grenoble, France.,From the Division of Immune Regulation, La Jolla Institute for Allergy and Immunology (LJI), La Jolla, California 92037.,Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC, V5A 1S6, Canada. [e-mail].,Center for Matrix Biology, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA.,Département de biochimie, de microbiologie, et de bioinformatique, Faculté des sciences et de génie, Groupe de recherche en écologie buccale, Faculté de médecine dentaire, Université Laval, Québec City, QC, G1V 0A6, Canada. [e-mail].,Univ. Lyon, ENS de Lyon, Univ. Claude Bernard, CNRS UMR 5239, INSERM U1210, LBMC, 46 allée d'Italie Site Jacques Monod, F-69007, Lyon, France.,Department of Microbiology, UT Southwestern Medical Center, Dallas, TX 75390.,Institut für Pharmazeutische und Medizinische Chemie, PharmaCampus, Westfälische Wilhelms-Universität Münster, Corrensstraße 48, D-48149 Münster, Germany. [e-mail].,Department of Biochemistry, UT Southwestern Medical Center, Dallas, TX 75390.,Laboratory of Molecular Modeling and Design, State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian, Liaoning, China.,School of Sports Sciences, Central University of Rajasthan, Rajasthan, India.,National Magnetic Resonance Facility at Madison , University of Wisconsin-Madison , 433 Babcock Drive , Madison , Wisconsin 53706 , United States.,Gene Expression & Regulation Program, Wistar Institute, Philadelphia, Pennsylvania.,FLX Bio, South San Francisco, CA, USA.,From the Departments of Molecular Biosciences and [e-mail].,Systems Immunity Research Institute, Cardiff University, Cardiff, Wales, United Kingdom.,Department of Microbiology-Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.,the Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo, Hokkaido 060-0810, Japan, and.,Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 CNRS/UCB Lyon 1/ENS Lyon), Université de Lyon, 69100, Villeurbanne, France.,Department of Chemistry, University of Texas at San Antonio , San Antonio, Texas 78249, United States.,From the State Key Laboratory of Cellular Stress Biology, Innovation Center for Cell Signaling Network, School of Life Sciences, Xiamen University, Fujian 361005, China [e-mail].,Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.,Department of Microbiology-Immunology, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA. [e-mail].,Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee DD1 5HE, UK.,Immunology Division, Garvan Institute of Medical Research, 384 Victoria Road, Darlinghurst, Sydney, NSW, 2010, Australia.,Faculty of Advanced Life Science, Hokkaido University, N-10, W-8, Sapporo 060-0810, Japan.,Gene Center Munich and Department of Biochemistry, Ludwig Maximilian University of Munich, 81377 Munich, Germany; Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA. Electronic address: [e-mail].,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Howard Hughes Medical Institute, Boston, United States.,Michael Smith Laboratories, University of British Columbia, 2185 East Mall, Vancouver, BC V6T 1Z4, Canada.,Aduro Biotech, Berkeley, CA, USA.,Department of Infectious Diseases, King's College London, Faculty of Life Sciences & Medicine, London SE1 9RT, UK. Electronic address: [e-mail].,Institut für Pharmazeutische und Medizinische Chemie, PharmaCampus, Westfälische Wilhelms-Universität Münster, Corrensstraße 48, D-48149 Münster, Germany. [e-mail].,College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, 712100, China. Electronic address: [e-mail].,Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA. [e-mail].,Molecular Biology Institute, University of California, Los Angeles, Los Angeles, CA, USA. [e-mail].,3Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Edmonton, T6G 2G2 AB Canada.,Mitchell Cancer Institute, The University of South Alabama, Mobile, Alabama.,Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, CA, USA.,Department of Biotechnology , The University of Tokyo , 1-1-1 Yayoi , Bunkyo-ku, Tokyo 113-8657 , Japan.,Macromolecular Crystallography Group, Structural Biology and Biocomputing Program, Spanish National Cancer Research Center (CNIO), c/Melchor Fernández Almagro 3, 28029, Madrid, Spain.,Department of Microchem Proteomics, Genentech, South San Francisco, CA, USA.,Department of Molecular Biology, University of Geneva, Geneva 4, Switzerland.,the Department of Neuroscience, Mayo Clinic College of Medicine, Jacksonville, Florida 32224.,Heptares Therapeutics Ltd. , BioPark , Welwyn Garden City , Hertfordshire AL7 3AX , U.K.,Department of Pharmacology, University of California, Irvine, CA 92697.,National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.,Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA, USA.,Department of Immunology, University of Toronto, Toronto, ON, M5S 1A8, Canada.,Department of Clinical Science, Kumamoto University Hospital, Kumamoto, 860-8556, Japan.,European Molecular Biology Laboratory, Grenoble Outstation, University of Grenoble Alpes-EMBL-CNRS, Grenoble, France.,Institute of Microbiology and Infection, School of Immunity and Infection, University of Birmingham, Birmingham, United Kingdom.,Biosciences Division, SLAC National Accelerator Laboratory, Stanford University, Stanford, CA, USA.,VIB-VUB Center for Structural Biology, VIB, Brussels, Belgium.,National Research Laboratory of Molecular Microbiology and Toxicology, Department of Agricultural Biotechnology, and Center for Food Safety and Toxicology, Seoul National University, Seoul, South Korea [e-mail] [e-mail].,Institut für Biochemie, Department für Chemie, Universität zu Köln, Zülpicher Straße 47, D-50674 Köln, Germany. [e-mail].,Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Ave. 33, Bld. 2, Moscow, 119071, Russian Federation.,Dipartimento di Bioscienze, Università degli Studi di Milano, 20133, Milano, Italy. [e-mail].,Integrative Biomedical Sciences, University of Cape Town, Observatory 7925, Cape Town, 8000, South Africa [e-mail].,Michael Smith Laboratories, University of British Columbia, 2185 East Mall, Vancouver, BC V6T 1Z4, Canada; Department of Chemistry, University of British Columbia, 2036 Main Mall, Vancouver, BC V6T 1Z1, Canada; Department of Biochemistry and Molecular Biology, University of British Columbia, 2350 Health Sciences Mall, Vancouver, BC V6T 1Z3, Canada.,Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, CA, USA. [e-mail].,Department of Molecular Biology and Biochemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC, V5A 1S6, Canada.,Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, 599-8531, Japan. [e-mail].,WM Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA. Electronic address: [e-mail].,the Molecular Biophysics and Integrated Bioimaging Division, Berkeley Center for Structural Biology, Lawrence Berkeley National Laboratory, Berkeley, California 94720, and.,Koch Institute for Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA.,Max-Planck-Institut für Molekulare Genetik, Microscopy and Cryo-Electron Microscopy Group, Ihnestraße 63-73, 14195 Berlin, Germany.,Department of Chemistry , University of Nevada, Reno , 1664 North Virginia Street , Reno , Nevada 89557 , United States.,University of Cape Town, Anzio Road, Observatory, Cape Town, 7925, South Africa.,Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC, V5A 1S6, Canada. [e-mail].,CryoEM Shared Resources, Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA.,Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), C/ Baldiri Reixac, 10, 08028, Barcelona, Spain.,Structural Molecular Biology Group, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark. [e-mail].,Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK.,Membrane Biochemistry and Biophysics, Department of Chemistry, Faculty of Science, Utrecht University, Utrecht, 3584, The Netherlands.,Centre de RMN à Très Hauts Champs, Institut des Sciences Analytiques (UMR 5280 CNRS/UCB Lyon 1/ENS Lyon), Université de Lyon, 69100, Villeurbanne, France. [e-mail].,Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, 3800, Australia.,The University of New South Wales, Faculty of Medicine, St Vincent's Clinical School, Darlinghurst, Sydney, NSW, 2010, Australia.,California NanoSystems Institute, University California Los Angeles, Los Angeles, CA 90095, USA.,HudsonAlpha Institute for Biotechnology, Huntsville, Alabama.,N. D. Zelinsky Institute of Organic Chemistry (ZIOC RAS), Leninsky Prospekt, 47, Moscow, 119991, Russian Federation.,Division of Molecular Biotherapy, Cancer Chemotherapy Center , Japanese Foundation for Cancer Research , 3-8-31 Ariake , Koto-ku, Tokyo 135-8850 , Japan.,Departamento de Química, Universidade Nova de Lisboa, Caparica, 2829-516, Portugal.,Department of Structural Biology, Stanford University School of Medicine, Stanford, CA, USA.,i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.,Department of Biochemistry, McGill University, Montreal, H3G0B1, Canada; [e-mail].,The Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.,Vertex, San Diego, CA, USA.,From the Departments of Molecular Biosciences and.,State Key Laboratory of Cell Biology, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, Shanghai, China.,Dahlem Centre of Plant Sciences, Department of Plant Physiology and Biochemistry, Freie Universität Berlin, Königin-Luise-Straße 12-16, 14195, Berlin, Germany.,Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China; Center for Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China. Electronic address: [e-mail].,Chemical Kinomics Research Center, Korea Institute of Science and Technology (KIST), 5 Hwarangro 14-gil, Seongbuk-gu, Seoul 02792, Republic of Korea; KU-KIST Graduate School of Converging Science and Technology, Korea University, 145 Anam-ro, Seongbuk-gu, Seoul 02841, Republic of Korea.,Carbapenemase-producing Enterobacteriaceae , Associated French National Reference Center for Antibiotic Resistance , 78 rue du Général Leclerc , 94275 Le Kremlin-Bicêtre , France.,Department of Computer and Information Science, Faculty of Science and Technology , University of Macau , E11, Macau 999078 , China.,Department of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.,From the State Key Laboratory of Cellular Stress Biology, Innovation Center for Cell Signaling Network, School of Life Sciences, Xiamen University, Fujian 361005, China [e-mail].,Department of Biochemistry and Biophysics, Arrhenius Laboratories for Natural Sciences, Stockholm University, Stockholm, Sweden.,Biomedical Sciences Research Complex, University of St Andrews, North Haugh, St Andrews, Fife, KY16 9ST, UK. [e-mail].,State Key Laboratory of Molecular Biology, Shanghai Science Research Center, CAS Center for Excellence in Molecular Cell Science, Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Shanghai, China.,Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, 062-8517, Japan. [e-mail].,Department of Pathology , University of Michigan , Ann Arbor , Michigan 48109 , United States.,Laboratory of Cell Responses, National Institute for Basic Biology, Okazaki, Aichi, Japan.,Center for Environmental Health Sciences MIT, Massachusetts Institute of Technology, Cambridge, MA, USA.,Department of Crystal and Structural Chemistry, Bijvoet Center for Biomolecular Research Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands.,Center for Matrix Biology, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA. [e-mail].,Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, 565-0871, Japan.,Division of Structural Biology , University of Oxford , The Henry Wellcome Building for Genomic Medicine , Headington, Oxford OX3 7BN , U.K.,Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133, Milano, Italy.,Division of Computational Biology, School of Life Sciences, University of Dundee, Dundee DD1 5HE, UK; School of Physics and Engineering, University of Dundee, Dundee DD1 5HE, UK.,Department of Agrifood Production and Environmental Sciences, University of Florence, Florence, Italy.,Center for Infectious Disease Research, Seattle, Washington, 98109.,Immunology Division, Garvan Institute of Medical Research, 384 Victoria Road, Darlinghurst, Sydney, NSW, 2010, Australia. [e-mail].,Structural Biology and Bioinformatics Division, Council of Scientific and Industrial Research - Indian Institute of Chemical Biology, Kolkata, India.,Infection and Immunity Program, Biomedicine Discovery Institute and Department of Microbiology, Monash University, Clayton, Australia.,the Stanford Synchrotron Radiation Light Source, Menlo Park, California 94025.,Duke Human Vaccine Institute, Duke University, Durham, NC 27710, USA.,Department of Chemistry, Wuxi AppTec, Shanghai, China.,Institute of Biochemistry, Center for Structural and Cell Biology in Medicine, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany.,Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA, USA.,Ipsen Innovation , 5, Avenue du Canada , Les Ulis , France 91940 . Email: [e-mail] ; Tel: [phone].,Bijvoet Center for Biomolecular Research, Department of Biochemistry of Membranes, University of Utrecht, Padualaan 8, 3584 CH, Utrecht, The Netherlands.,Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, 14853, USA.,Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.,Parker Institute for Cancer Immunotherapy, University of California, San Francisco, CA, 94143, USA.,Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Sapporo, 062-8517, Japan.,the Department of Cancer Biology, Mayo Clinic Comprehensive Cancer Center, Jacksonville, Florida 32224, [e-mail].,Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, LS2 9JT, UK. [e-mail].,Freie Universität Berlin, Laboratory of Structural Biochemistry, Takustraβe 6, 14195 Berlin, Germany; Helmholtz-Zentrum Berlin für Materialien und Energie, Macromolecular Crystallography, Albert-Einstein-Straße 15, 12489 Berlin, Germany. Electronic address: [e-mail].,the Department of Cancer Biology, Mayo Clinic Comprehensive Cancer Center, Jacksonville, Florida 32224.,Protein Production and Characterization Platform, Novo Nordisk Foundation Centre for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.,Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.,Department of Immunology, University of Toronto, Toronto, ON, M5S 1A8, Canada. [e-mail].,Division of Structural Biology, University of Oxford, Roosevelt Drive, Oxford, OX37BN, United Kingdom.,the National Institute for Biotechnology in the Negev (NIBN), Beer-Sheva 84105, Israel.,Institute for Protein Innovation, Boston, Massachusetts, 02115.,Department of Microbiology and Immunology, University of California, San Francisco, CA, 94143, USA.,ARC Centre of Excellence in Advanced Molecular Imaging, Monash University, Clayton, Victoria, 3800, Australia.,National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China. [e-mail].,Medicinal Chemistry Research Group, Research Centre for Natural Sciences , Hungarian Academy of Sciences , 2 Magyar tudósok körútja , Budapest H-1117 , Hungary.,Department de Química Física i Analítica, Universitat Jaume I, 12071, Castellón, Spain.,Institut für Pharmazeutische und Medizinische Chemie, Heinrich-Heine-Universität Düsseldorf, Universitätsstraße 1, D-40225 Düsseldorf, Germany. [e-mail].,School of Pharmacy and Pharmaceutical Sciences, Biomedical Sciences Research Institute, Ulster University, Coleraine BT52 1SA, UK.,UCLA-DOE Institute for Genomics and Proteomics, University of California, Los Angeles, Los Angeles, CA, USA.,5Wuhan National Laboratory for Optoelectronics, Wuhan, Hubei Province 430074 China.,the Faculty of Advanced Life Science, Hokkaido University, Sapporo, Hokkaido 011-0021, Japan.,National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg 2131, South Africa; Faculty of Health Sciences, University of the Witwatersrand, Johannesburg 2000, South Africa; Centre for the AIDS Programme of Research in South Africa (CAPRISA), University of KwaZulu Natal, Durban 4041, South Africa.,Faculty of science and engineering, Kinki University, 3-4-1 Kowakae, Higashi-Osaka, 577-8502, Japan.,Key Laboratory of Infection and Immunity, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.,Faculty of Chemistry and Chemical Biology, TU Dortmund University , Otto-Hahn-Str. 6, 44227 Dortmund, Germany.,Department of Microbiology and Immunology, The Peter Doherty Institute, The University of Melbourne, Parkville, Australia.,From the Avram and Stella Goldstein-Goren Department of Biotechnology Engineering and the National Institute of Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel.,Department of Biochemistry, University of Washington, Seattle, Washington, 98195.,Howard Hughes Medical Institute, University of California, Berkeley, United States.,Institute of Image Processing and Pattern Recognition, Shanghai Jiaotong University, Shanghai, China.,Present address: Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Tomtebodavägen 23A, 171 65, Solna, Sweden.,Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.,Institute for Integrative Biology of the Cell (I2BC), CNRS CEA Univ. Paris-Sud, Université Paris-Saclay, Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.,Henry Wellcome Building for Biocatalysis, Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, EX4 4QD, UK.,Centre for Bacterial Cell Biology, Institute for Cell and Molecular Bioscience, Newcastle University, Newcastle Upon Tyne, NE2 4AX, United Kingdom.,Centre for the AIDS Programme of Research in South Africa (CAPRISA), University of KwaZulu Natal, Durban 4041, South Africa.,College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, 712100, China.,Center for Structural Genomics of Infectious Diseases, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.,Dipartimento di Bioscienze, Università degli Studi di Milano, 20133, Milano, Italy.,IBMC - Instituto de Biologia Molecular e Celular, Universidade do Porto, Porto, Portugal.,ICBAS - Instituto de Ciências Biomédicas Abel Salazar, Porto, Portugal.,Department of Molecular and Cell Biology, University of California, Berkeley, United States.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.,High Magnet Field Laboratory, Chinese Academy of Science, 50 Shushanhu Road, Hefei, Anhui 230031, China.,Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: [e-mail].,Aspirnaut Summer research program, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA.,Medizinische Physik und Biophysik, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany. Electronic address: [e-mail].,Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611, USA.,Department of Pharmacology, Emory University School of Medicine, Atlanta, GA 30322, USA.,Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada. [e-mail].,Department of Inflammation and Oncology, Amgen Inc., South San Francisco, CA, United States of America.,TIMC-IMAG, University of Grenoble Alpes, Grenoble, France.,Department of Infectious Diseases, King's College London, Faculty of Life Sciences & Medicine, London SE1 9RT, UK.,Department of Biochemistry and Biophysics, Arrhenius Laboratories for Natural Sciences, Stockholm University, Stockholm, Sweden. [e-mail].,Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts.,Gene Center Munich and Department of Biochemistry, Ludwig Maximilian University of Munich, 81377 Munich, Germany.,Bioinformatics Institute , ASTAR (Agency for Science, Technology and Research) , 30 Biopolis Street, #07-01 Matrix , Singapore 138671 . Email: [e-mail] ; Tel: [phone].,Department of Bioinformatics and Computational Biology, Genentech, South San Francisco, CA, USA.,Present address: Max-Planck-Institut für Molekulare Physiologie, Compound Management and Screening Center (COMAS), Otto-Hahn-Straße 11, 44227, Dortmund, Germany.,ConfometRx, Santa Clara, CA, USA. [e-mail].,Department of Biophysics, UT Southwestern Medical Center, Dallas, TX 75390.,Department of Chemistry, Center for Integrated Protein Science Munich (CIPSM), Technische Universität München, Garching, Germany. [e-mail].,the Materials Sciences Research Center, Japan Atomic Energy Agency, Tokai, Ibaraki 319-1195, Japan.,Department of Chemistry, University of Duisburg-Essen, Essen, Germany.,Departments of Biochemistry and Radiation Oncology, The University of Texas Southwestern Medical Center at Dallas, Dallas, TX 75390, USA.,Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA, USA. [e-mail].,Seattle Structural Genomics Center for Infectious Diseases, Seattle, Washington.,Merck & Co., Department of Biochemical Engineering and Structure, 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA.,Department of Protein Technologies, Amgen Inc., Cambridge, MA, United States of America.,CEA, LETI, CLINATEC, MINATEC Campus, University of Grenoble Alpes, Grenoble, France.,Life Sciences Institute and Department of Biological Chemistry, University of Michigan Medical School, Ann Arbor, MI, USA.,p53 Laboratory , ASTAR (Agency for Science, Technology and Research) , 8A Biomedical Grove, #06-04/05, Neuros/Immunos , Singapore 138648 . Email: [e-mail] ; Tel: [phone].,Institute of Infection and Immunity, Cardiff University School of Medicine, Heath Park, Cardiff, CF14 4XN, UK. [e-mail].,ESRF - The European Synchrotron, 38043, Grenoble, France.,Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Ås, 1432, Norway.,Faculty of Pharmaceutical Sciences, Sojo University, Kumamoto, 860-0082, Japan.,Protein Structure-Function Research Unit, University of the Witwatersrand, Johannesburg 2000, South Africa.,CNRS UMR5048, Centre de Biochimie Structurale, Université de Montpellier, Montpellier, France.,CNRS, TIMC-IMAG, UMR CNRS 5525, Grenoble, France.,University of Cape Town, Cape Town, South Africa.,Department of Biomolecular Science, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi 980-8577, Japan.,PRESTO, Japan Science and Technology Agency, Tokyo 102-0076, Japan.,National Center for Global Health and Medicine Research Institute, Tokyo, 162-8655, Japan.,Department of Chemistry , University of Oxford , Mansfield Road , Oxford OX1 3TA , U.K.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA. Electronic address: [e-mail].,From the Molecular Biology and [e-mail].,Department of Oncological Sciences, Icahn School of Medicine at Sinai, New York, NY, USA.,Division of Biological Chemistry and Drug Discovery, School of Life Sciences, James Black Centre , University of Dundee , Dow Street , DD1 5EH Dundee , Scotland, U.K.,Ipsen Bioscience , 650 East Kendall Street , Cambridge , MA 02142 , USA.,Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, 1266 Tamura-Cho, Nagahama, Shiga 526-0829, Japan.,Institut für Biochemie, Department für Chemie, Universität zu Köln, Zülpicher Straße 47, D-50674 Köln, Germany. [e-mail].,Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, CA, 91125, USA. [e-mail].,Evolution and Ecology of Resistance to Antibiotics Unit , Institut Pasteur, APHP, Université Paris Sud , 25-28 Rue du Dr Roux , 75015 Paris , France.,Division of Plant Biology, Department of Biosciences, University of Helsinki, FIN-00014, Helsinki, Finland.,European Molecular Biology Laboratory Heidelberg, Genome Biology Unit, Meyerhofstraße 1, 69117, Heidelberg, Germany.,NDBio Therapeutics Inc., Incheon 21984, Republic of Korea.,Department of Pediatrics and Human Development, Michigan State University, Grand Rapids, Michigan.,Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115, USA; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Blais Proteomics Center, Dana-Farber Cancer Institute, Boston, MA 02115, USA.,Laboratoire National de Santé, Dudelange, Luxembourg.,2Department of Biochemistry, University of Toronto, Toronto, M5S 1A8 ON Canada.,Department of Microbiology, Immunology, & Molecular Genetics, University of California Los Angeles, Los Angeles, CA 90095, USA.,Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA, USA. [e-mail].,Division of Cancer Studies, King's College London, London SE1 1UL, UK.,Hospital for Sick Children, Toronto, Ontario, Canada.,Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India.,University of Cape Town, Anzio Road, Observatory, Cape Town, 7945, South Africa.,Institut de Chimie des Substances Naturelles, CNRS, Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.,Present address, Medical Research Council Laboratory of Molecular Biology, Francis Crick Avenue, CB2 0QH, Cambridge, UK.,Leicester Institute of Structural and Chemical Biology, University of Leicester, Lancaster Road, Leicester, LE1 7RH, UK. [e-mail].,HudsonAlpha Institute for Biotechnology, Huntsville, Alabama; [e-mail] [e-mail].,Department of Biochemistry, McGill University, Montreal, H3G0B1, Canada.,From the Avram and Stella Goldstein-Goren Department of Biotechnology Engineering and the National Institute of Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 84105, Israel, [e-mail].,Department of Biomedical Engineering and Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, The Netherlands.,Department of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037, USA; IAVI Neutralizing Antibody Center and Collaboration of AIDS Vaccine Discovery, The Scripps Research Institute, La Jolla, CA 92037, USA.,Department of Applied Biotechnology and Food Science, Budapest University of Technology and Economics, Budapest, Hungary.,Medizinische Biochemie und Molekularbiologie, Universität des Saarlandes, Kirrberger Str., Geb. 44, D-66421 Homburg, Germany. [e-mail].,Freie Universität Berlin, Laboratory of Structural Biochemistry, Takustraβe 6, 14195 Berlin, Germany.,Center for Structural Biology, Vanderbilt University Medical Center, Nashville, TN, 37232-2372, USA. [e-mail].,CNRS, University Grenoble Alpes, CEA, Institut de Biologie Structurale (IBS), 38000 Grenoble, France.,Institut for Advanced Biosciences, UMR InsermU1209/CNRS5309/UGA, University of Grenoble Alpes, Grenoble, France [e-mail].,Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10027, USA; Vaccine Research Center, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892-9806, USA.,HRMEM Facility, University of British Columbia, Vancouver, BC, Canada.,University of Chinese Academy of Sciences, Beijing, 100049, China.,the Department of Internal Medicine, Faculty of Medicine and Health Sciences, Ghent University, 9000 Ghent, Belgium.,Boehringer Ingelheim RCV GmbH & Co KG , 1221 Vienna , Austria.,Department of Anatomy and Neurobiology, University of California, Irvine, CA 92697.,Diamond Light Source Limited , Harwell Science & Innovation Campus , Didcot OX11 0DE , U.K.,Broad Institute of Harvard and MIT, Cambridge, MA, USA.,Institut de Biologie Structurale (IBS), Univ. Grenoble Alpes, CNRS, CEA, 71 avenue des Martyrs, 38000, Grenoble, France.,Department of Discovery Chemistry, Genentech, South San Francisco, CA, USA.,Section on Nephrology, Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, North Carolina; and.,Department of Chemistry and Biochemistry, University of California, Los Angeles, Los Angeles, CA, USA. [e-mail].,Amgen Postdoctoral Fellow Program, Amgen Inc., Cambridge, MA, United States of America.,School of Biochemistry, University of Bristol, Bristol, United Kingdom.,Institut für Pharmazeutische und Medizinische Chemie, PharmaCampus, Westfälische Wilhelms-Universität Münster, Corrensstraße 48, D-48149 Münster, Germany. [e-mail].,Unit for Virus Host-Cell Interactions, University of Grenoble Alpes-EMBL-CNRS, Grenoble, France.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Ubiquitin	A	76	Homo sapiens	Mutation(s): 0  Gene Names: UBB
Find proteins for P0CG47 (Homo sapiens) Go to Gene View: UBB Go to UniProtKB:  P0CG47

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details
Ubiquitin	B	76	Homo sapiens	Mutation(s): 1  Gene Names: UBB
Find proteins for P0CG47 (Homo sapiens) Go to Gene View: UBB Go to UniProtKB:  P0CG47

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details
Proteasomal ubiquitin receptor ADRM1	C	150	Homo sapiens	Mutation(s): 0  Gene Names: ADRM1 (GP110)
Find proteins for Q16186 (Homo sapiens) Go to Gene View: ADRM1 Go to UniProtKB:  Q16186

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 240 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2017-10-22 
• Released Date: 2019-03-13 
• Deposition Author(s): Liu, Z., Dong, X., Gong, Z., Yi, H.W., Liu, K., Yang, J., Zhang, W.P., Tang, C.

---

Funding Organization	Location	Grant Number
Ministry of Science and Technology (China)	China	2016YFA0501200
National Basic Research Program of China(973 Program)	China	2013CB910200
National Natural Science Foundation of China	China	31770799
National Natural Science Foundation of China	China	81573400
National Natural Science Foundation of China	China	31500595
National Natural Science Foundation of China	China	31400735
National Natural Science Foundation of China	China	31400644

Revision History 

• Version 1.0: 2019-03-13
  Type: Initial release
• Version 1.1: 2019-04-17
  Type: Data collection, Database references
• Version 1.2: 2019-04-24
  Type: Data collection, Database references