Download Mendeley
Download EndnoteGreen fluorescent protein linked peptide inhibitor PMI in complex with mdm2
Chee, S.M.Q., Wongsantichon, J., Sana, B., Robinson, R.C., Ghadessy, F.J.To be published.
5WTS
Green fluorescent protein linked peptide inhibitor PMI in complex with mdm2
- DOI: 10.2210/pdb5WTS/pdb
- Classification: LIGASE/LIGASE INHIBITOR
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Deposited: 2016-12-14 Released: 2017-12-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.004 Å
- R-Value Free: 0.244
- R-Value Work: 0.204
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Green fluorescent protein linked PMI inhibitor | A | 360 | N/A | Mutation(s): 0 |
| Protein Feature View is not available: No corresponding UniProt sequence found. | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| E3 ubiquitin-protein ligase Mdm2 | B | 122 | Homo sapiens | Mutation(s): 0 Gene Names: MDM2 EC: 2.3.2.27 |
Find proteins for Q00987 (Homo sapiens) Go to Gene View: MDM2 Go to UniProtKB: Q00987 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A, B | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| GOL Query on GOL | A | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| PG4 Query on PG4 | B | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| CRO Query on CRO | A | L-PEPTIDE LINKING | C15 H17 N3 O5 |  | THR, TYR, GLY |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.004 Å
- R-Value Free: 0.244
- R-Value Work: 0.204
- Space Group: I 2 2 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 51.766 | α = 90.00 |
| b = 98.422 | β = 90.00 |
| c = 218.988 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
Entry History
Deposition Data
- Deposited Date: 2016-12-14
- Released Date: 2017-12-20
- Deposition Author(s): Wongsantichon, J., Robinson, R.C., Ghadessy, F.J.
