5W4E

Importin binding to Tdt NLS peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.18 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.165 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Importin with bound NLS Tdt peptide

Pedersen, L.C.London, R.Gabel, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Importin subunit alpha-1,Importin subunit alpha-1
B
510Mus musculusGlaciozyma antarctica
This entity is chimeric
Mutation(s): 0 
Gene Names: Kpna2 (Rch1),
EC: 3.5.3.1
Find proteins for P52293 (Mus musculus)
Go to UniProtKB:  P52293
Find proteins for A0A2R2JFW7 (Glaciozyma antarctica)
Go to UniProtKB:  A0A2R2JFW7
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
human DNA repair polymerase Tdt
A, D
16Homo sapiensMutation(s): 0 
Gene Names: DNTT (TDT)
EC: 2.7.7.31
Find proteins for P04053 (Homo sapiens)
Go to Gene View: DNTT
Go to UniProtKB:  P04053
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.18 Å
  • R-Value Free: 0.192 
  • R-Value Work: 0.165 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 78.683α = 90.00
b = 89.493β = 90.00
c = 100.296γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
HKL-2000data scaling
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-06-27
    Type: Initial release