5VSZ

Structure of the Ubl domain of Sacsin mutant L78M


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.218 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations.

Menade, M.Kozlov, G.Trempe, J.F.Pande, H.Shenker, S.Wickremasinghe, S.Li, X.Hojjat, H.Dicaire, M.J.Brais, B.McPherson, P.S.Wong, M.J.H.Young, J.C.Gehring, K.

(2018) J. Biol. Chem. 293: 12832-12842


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sacsin
A, B
89Homo sapiensMutation(s): 1 
Gene Names: SACS (KIAA0730)
Find proteins for Q9NZJ4 (Homo sapiens)
Go to Gene View: SACS
Go to UniProtKB:  Q9NZJ4
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.218 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 52.140α = 90.00
b = 61.450β = 90.00
c = 91.570γ = 90.00
Software Package:
Software NamePurpose
RESOLVEphasing
SCALAdata scaling
SOLVEphasing
PHENIXrefinement
PDB_EXTRACTdata extraction
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
ARSACS FoundationCanada--

Revision History 

  • Version 1.0: 2017-05-31
    Type: Initial release
  • Version 1.1: 2018-07-11
    Type: Data collection, Database references
  • Version 1.2: 2018-08-29
    Type: Data collection, Database references