5TVL

Crystal structure of foldase protein PrsA from Streptococcus pneumoniae str. Canada MDR_19A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.225 
  • R-Value Observed: 0.229 

wwPDB Validation   3D Report Full Report


This is version 2.0 of the entry. See complete history


Literature

Crystal structure of foldase protein PrsA from Streptococcus pneumoniae str. Canada MDR_19A

Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Foldase protein PrsAA, B, C, D287Streptococcus pneumoniae str. Canada MDR_19AMutation(s): 0 
Gene Names: prsASPH_1082
EC: 5.2.1.8
UniProt
Find proteins for B1IBE1 (Streptococcus pneumoniae (strain Hungary19A-6))
Explore B1IBE1 
Go to UniProtKB:  B1IBE1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupB1IBE1
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
F [auth A],
K [auth B],
L [auth B]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

Download Ideal Coordinates CCD File 
G [auth A],
M [auth B],
P [auth C],
Q [auth C],
S [auth D],
G [auth A],
M [auth B],
P [auth C],
Q [auth C],
S [auth D],
T [auth D],
U [auth D]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

Download Ideal Coordinates CCD File 
E [auth A],
H [auth B],
I [auth B],
J [auth B],
N [auth C],
E [auth A],
H [auth B],
I [auth B],
J [auth B],
N [auth C],
O [auth C],
R [auth D]
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 72.315α = 90
b = 70.94β = 91.49
c = 116.626γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling
HKL-3000phasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-11-23
    Type: Initial release
  • Version 1.1: 2016-11-30
    Changes: Structure summary
  • Version 2.0: 2021-02-17
    Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Structure summary