PanDDA analysis group deposition
Talon, R., Krojer, T., Diaz-Saez, L., Bradley, A.R., Aimon, A., Fairhead, M., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Huber, K.V.M., von Delft, F.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cleavage and polyadenylation specificity factor subunit 5 | 197 | Homo sapiens | Mutation(s): 0  Gene Names: NUDT21, CFIM25, CPSF25, CPSF5 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O43809 (Homo sapiens) Explore O43809  Go to UniProtKB:  O43809 | |||||
PHAROS:  O43809 GTEx:  ENSG00000167005  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O43809 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
M0J (Subject of Investigation/LOI) Query on M0J | G [auth A] | N-[(2S)-2-hydroxypropyl]-N'-phenylurea C10 H14 N2 O2 XEAXHIGGZMUNSO-QMMMGPOBSA-N | |||
ZN Query on ZN | C [auth A] D [auth A] H [auth B] I [auth B] J [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
ACT Query on ACT | E [auth A], F [auth A], L [auth B] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 59.85 | α = 90 |
b = 59.85 | β = 90 |
c = 215.19 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |