5QED

PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOPL000538a


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.755 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.183 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Allosteric inhibition of a dynamic enzyme from multitemperature crystallography, fragment screening, and covalent tethering

Keedy, D.A.Hill, Z.B.Biel, J.T.Kang, E.Rettenmaier, T.J.Brandao-Neto, J.von Delft, F.Wells, J.A.Fraser, J.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tyrosine-protein phosphatase non-receptor type 1
A
321Homo sapiensMutation(s): 2 
Gene Names: PTPN1 (PTP1B)
EC: 3.1.3.48
Find proteins for P18031 (Homo sapiens)
Go to Gene View: PTPN1
Go to UniProtKB:  P18031
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
7MU
Query on 7MU

Download SDF File 
Download CCD File 
A
4-chloranyl-~{N}-methyl-pyridine-2-carboxamide
C7 H7 Cl N2 O
BGVBBMZMEKXUTR-UHFFFAOYSA-N
 Ligand Interaction
TRS
Query on TRS

Download SDF File 
Download CCD File 
A
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.755 Å
  • R-Value Free: 0.207 
  • R-Value Work: 0.183 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 89.783α = 90.00
b = 89.783β = 90.00
c = 106.494γ = 120.00
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
PHENIXrefinement
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-10-10
    Type: Initial release