5P4M

Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 211


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.07 Å
  • R-Value Free: 0.151 
  • R-Value Work: 0.133 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

High-Throughput Crystallography: Reliable and Efficient Identification of Fragment Hits.

Schiebel, J.Krimmer, S.G.Rower, K.Knorlein, A.Wang, X.Park, A.Y.Stieler, M.Ehrmann, F.R.Fu, K.Radeva, N.Krug, M.Huschmann, F.U.Glockner, S.Weiss, M.S.Mueller, U.Klebe, G.Heine, A.

(2016) Structure 24: 1398-1409


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
endothiapepsin
A
330Cryphonectria parasiticaMutation(s): 0 
Gene Names: EAPA (EPN-1)
EC: 3.4.23.22
Find proteins for P11838 (Cryphonectria parasitica)
Go to UniProtKB:  P11838
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.07 Å
  • R-Value Free: 0.151 
  • R-Value Work: 0.133 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 45.311α = 90.00
b = 72.976β = 109.67
c = 52.806γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
XDSdata reduction
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-08-03
    Type: Initial release
  • Version 1.1: 2016-08-10
    Type: Database references
  • Version 1.2: 2017-01-11
    Type: Database references
  • Version 1.3: 2018-02-21
    Type: Structure summary