5NRA

Crystal structure of human chitotriosidase-1 (hCHIT) catalytic domain in complex with compound 7g


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.267 Å
  • R-Value Free: 0.163 
  • R-Value Work: 0.137 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Targeting Acidic Mammalian chitinase Is Effective in Animal Model of Asthma.

Mazur, M.Olczak, J.Olejniczak, S.Koralewski, R.Czestkowski, W.Jedrzejczak, A.Golab, J.Dzwonek, K.Dymek, B.Sklepkiewicz, P.L.Zagozdzon, A.Noonan, T.Mahboubi, K.Conway, B.Sheeler, R.Beckett, P.Hungerford, W.M.Podjarny, A.Mitschler, A.Cousido-Siah, A.Fadel, F.Golebiowski, A.

(2018) J. Med. Chem. 61: 695-710


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Chitotriosidase-1
A
377Homo sapiensMutation(s): 0 
Gene Names: CHIT1
EC: 3.2.1.14
Find proteins for Q13231 (Homo sapiens)
Go to Gene View: CHIT1
Go to UniProtKB:  Q13231
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
95K
Query on 95K

Download SDF File 
Download CCD File 
A
1-(5-azanyl-4~{H}-1,2,4-triazol-3-yl)-~{N}-[2-(4-bromophenyl)ethyl]-~{N}-(2-methylpropyl)piperidin-4-amine
C19 H29 Br N6
WDVUKPMRFMWTDG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.267 Å
  • R-Value Free: 0.163 
  • R-Value Work: 0.137 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 85.451α = 90.00
b = 105.579β = 90.00
c = 42.137γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
HKL-2000data reduction
PHASERphasing
PHENIXrefinement
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2018-03-28
    Type: Initial release