Synthetic nanobody in complex with MBP

Experimental Data Snapshot

  • Resolution: 1.9 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history


Synthetic single domain antibodies for the conformational trapping of membrane proteins.

Zimmermann, I.Egloff, P.Hutter, C.A.Arnold, F.M.Stohler, P.Bocquet, N.Hug, M.N.Huber, S.Siegrist, M.Hetemann, L.Gera, J.Gmur, S.Spies, P.Gygax, D.Geertsma, E.R.Dawson, R.J.Seeger, M.A.

(2018) Elife 7: --


Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Maltose-binding periplasmic protein
A, B
373Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: malE
Find proteins for P0AEX9 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AEX9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Synthetic nanobody L2_D09, (a-MBP#3)
C, D
128N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Resolution: 1.9 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.209 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 57.030α = 90.00
b = 57.780β = 90.00
c = 286.530γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-11-15
    Type: Initial release
  • Version 1.1: 2018-11-28
    Type: Data collection, Database references