5KPL

Glycogen Synthase Kinase 3 beta Complexed with BRD0705


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.178 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Exploiting an Asp-Glu "switch" in glycogen synthase kinase 3 to design paralog-selective inhibitors for use in acute myeloid leukemia.

Wagner, F.F.Benajiba, L.Campbell, A.J.Weiwer, M.Sacher, J.R.Gale, J.P.Ross, L.Puissant, A.Alexe, G.Conway, A.Back, M.Pikman, Y.Galinsky, I.DeAngelo, D.J.Stone, R.M.Kaya, T.Shi, X.Robers, M.B.Machleidt, T.Wilkinson, J.Hermine, O.Kung, A.Stein, A.J.Lakshminarasimhan, D.Hemann, M.T.Scolnick, E.Zhang, Y.L.Pan, J.Q.Stegmaier, K.Holson, E.B.

(2018) Sci Transl Med 10: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glycogen synthase kinase-3 beta
A, B
424Homo sapiensMutation(s): 0 
Gene Names: GSK3B
EC: 2.7.11.26
Find proteins for P49841 (Homo sapiens)
Go to Gene View: GSK3B
Go to UniProtKB:  P49841
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
6VL
Query on 6VL

Download SDF File 
Download CCD File 
A, B
(4~{S})-4-ethyl-7,7-dimethyl-4-phenyl-2,6,8,9-tetrahydropyrazolo[3,4-b]quinolin-5-one
C20 H23 N3 O
NCKLQXXBRWCYMA-FQEVSTJZSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
PTR
Query on PTR
A, B
L-PEPTIDE LINKINGC9 H12 N O6 PTYR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.244 
  • R-Value Work: 0.178 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 104.625α = 90.00
b = 85.428β = 95.08
c = 112.071γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-03-14
    Type: Initial release
  • Version 1.1: 2018-03-21
    Type: Database references