5KKJ

2.0-Angstrom In situ Mylar structure of hen egg-white lysozyme (HEWL) at 293 K

  • Classification: HYDROLASE
  • Organism(s): Gallus gallus

  • Deposited: 2016-06-21 Released: 2017-02-15 
  • Deposition Author(s): Broecker, J., Ernst, O.P.
  • Funding Organization(s): Government of Canada; German Research Foundation (DFG) 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.001 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.149 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A Versatile System for High-Throughput In Situ X-ray Screening and Data Collection of Soluble and Membrane-Protein Crystals.

Broecker, J.Klingel, V.Ou, W.-L.Balo, A.R.Kissick, D.J.Ogata, C.M.Kuo, A.Ernst, O.P.

(2016) Cryst.Growth Des. 16: 6318-6326


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Lysozyme C
A
129Gallus gallusGene Names: LYZ
EC: 3.2.1.17
Find proteins for P00698 (Gallus gallus)
Go to Gene View: LYZ
Go to UniProtKB:  P00698
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
PE5
Query on PE5

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Download CCD File 
A
3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, POLYETHYLENE GLYCOL PEG400
C18 H38 O9
CUDPPTPIUWYGFI-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
ACY
Query on ACY

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Download CCD File 
A
ACETIC ACID
C2 H4 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.001 Å
  • R-Value Free: 0.200 
  • R-Value Work: 0.149 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 79.064α = 90.00
b = 79.064β = 90.00
c = 38.336γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
XDSdata reduction
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationCountryGrant Number
Government of CanadaCanadaCanada Excellence Research Chair
German Research Foundation (DFG)GermanyBR 5124/1-1

Revision History 

  • Version 1.0: 2017-02-15
    Type: Initial release