5K4F

CAL PDZ mutant C319A with a peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.154 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

CAL PDZ domain mutant with a peptide

Zhao, Y.Madden, D.R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Golgi-associated PDZ and coiled-coil motif-containing protein
A, B
87Homo sapiensMutation(s): 1 
Gene Names: GOPC (CAL, FIG)
Find proteins for Q9HD26 (Homo sapiens)
Go to Gene View: GOPC
Go to UniProtKB:  Q9HD26
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
HPV18E6 peptide
C, D
10Human papillomavirus type 18Mutation(s): 0 
Gene Names: E6
Find proteins for P06463 (Human papillomavirus type 18)
Go to UniProtKB:  P06463
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.36 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.154 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 32.730α = 90.00
b = 48.276β = 101.76
c = 51.435γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
PHENIXphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2016-05-20 
  • Released Date: 2017-08-09 
  • Deposition Author(s): Zhao, Y., Madden, D.R.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney DiseaseUnited StatesR01-DK101541

Revision History 

  • Version 1.0: 2017-08-09
    Type: Initial release
  • Version 1.1: 2017-09-13
    Type: Author supporting evidence
  • Version 1.2: 2017-11-22
    Type: Refinement description