5IPK

Structure of the R432A variant of Adeno-associated virus type 2 VLP


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.7 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Cryo-electron Microscopy Reconstruction and Stability Studies of the Wild Type and the R432A Variant of Adeno-associated Virus Type 2 Reveal that Capsid Structural Stability Is a Major Factor in Genome Packaging.

Drouin, L.M.Lins, B.Janssen, M.Bennett, A.Chipman, P.McKenna, R.Chen, W.Muzyczka, N.Cardone, G.Baker, T.S.Agbandje-McKenna, M.

(2016) J.Virol. 90: 8542-8551


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Capsid protein VP1
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z, 1, 2, 3, 4, 5, 6, 7, 8
735Adeno-associated virus 2 (isolate Srivastava/1982)Mutation(s): 1 
Gene Names: VP1
Find proteins for P03135 (Adeno-associated virus 2 (isolate Srivastava/1982))
Go to UniProtKB:  P03135
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.7 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesGM33050
National Institutes of Health/National Heart, Lung, and Blood InstituteUnited StatesHL51811
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesAI1081961
National Institutes of Health/National Institute of General Medical SciencesUnited StatesT32-GM008799

Revision History 

  • Version 1.0: 2016-07-20
    Type: Initial release
  • Version 1.1: 2016-08-03
    Type: Database references
  • Version 1.2: 2016-09-28
    Type: Database references
  • Version 1.3: 2017-09-13
    Type: Author supporting evidence, Database references