5IC3

CAL PDZ domain with peptide and inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.177 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

CAL PDZ domain with peptide and inhibitor

Zhao, Y.Madden, D.R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Golgi-associated PDZ and coiled-coil motif-containing proteinA, B87Homo sapiensMutation(s): 0 
Gene Names: GOPCCALFIG
Find proteins for Q9HD26 (Homo sapiens)
Explore Q9HD26 
Go to UniProtKB:  Q9HD26
NIH Common Fund Data Resources
PHAROS  Q9HD26
Protein Feature View
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  • Reference Sequence
  • Find similar proteins by: Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
HPV18E6 PeptideC, D10Alphapapillomavirus 7Mutation(s): 0 
Find proteins for P06463 (Human papillomavirus type 18)
Explore P06463 
Go to UniProtKB:  P06463
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PQR
Query on PQR

Download CCD File 
A
4-[methyl(nitroso)amino]benzene-1,2-diol
C7 H8 N2 O3
XAKAQCMEMMZUEO-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.174 
  • R-Value Observed: 0.177 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 32.772α = 90
b = 48.252β = 101.47
c = 51.639γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata scaling
PHENIXphasing
XDSdata reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2016-02-22 
  • Released Date: 2017-08-09 
  • Deposition Author(s): Zhao, Y., Madden, D.R.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)United StatesR01-DK101541

Revision History 

  • Version 1.0: 2017-08-09
    Type: Initial release
  • Version 1.1: 2017-09-13
    Changes: Author supporting evidence
  • Version 1.2: 2019-12-25
    Changes: Author supporting evidence