5I6R

Crystal Structure of srGAP2 F-BARx WT Form-1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural Basis for srGAP2 Membrane Interactions, and Antagonism by the Human Specific Paralog srGAP2C

Sporny, M.Guez-Haddad, J.Isupov, M.N.Opatowsky, Y.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SLIT-ROBO Rho GTPase-activating protein 2
A
484Homo sapiensMutation(s): 1 
Gene Names: SRGAP2 (ARHGAP34, FNBP2, KIAA0456, SRGAP2A)
Find proteins for O75044 (Homo sapiens)
Go to Gene View: SRGAP2
Go to UniProtKB:  O75044
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACT
Query on ACT

Download SDF File 
Download CCD File 
A
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
MLT
Query on MLT

Download SDF File 
Download CCD File 
A
D-MALATE
(2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID
C4 H6 O5
BJEPYKJPYRNKOW-UWTATZPHSA-N
 Ligand Interaction
PGE
Query on PGE

Download SDF File 
Download CCD File 
A
TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.203 
  • Space Group: P 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 93.300α = 90.00
b = 29.760β = 92.99
c = 94.630γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
XDSdata scaling
XDSdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
ISFIsrael182/10 and 1425/15
BSFIsrael2013310

Revision History 

  • Version 1.0: 2017-08-30
    Type: Initial release