5H3K | pdb_00005h3k

Crystal structure of a hypothetical protein from Synechocystis

PDB DOI: https://doi.org/10.2210/pdb5H3K/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Synechocystis sp. PCC 6803 substr. Kazusa
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-10-25 Released: 2017-10-25
Deposition Author(s): Dong, L.-L., Wu, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free:
0.209 (Depositor), 0.210 (DCC)
R-Value Work:
0.172 (Depositor), 0.170 (DCC)
R-Value Observed:
0.173 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of a hypothetical protein from Synechocystis

Dong, L.-L., Wu, D., Gao, X.-Q., Zhou, M., Liu, Z.-J., Zhao, K.-H.

To be published.

Macromolecule Content

Total Structure Weight: 65.45 kDa
Atom Count: 4,525
Modeled Residue Count: 535
Deposited Residue Count: 610
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Slr0280 protein	A	610	Synechocystis sp. PCC 6803 substr. Kazusa	Mutation(s): 0 Gene Names: slr0280
UniProt
Find proteins for P74396 (Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)) Explore P74396 Go to UniProtKB: P74396
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P74396
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.209 (Depositor), 0.210 (DCC)
R-Value Work: 0.172 (Depositor), 0.170 (DCC)
R-Value Observed: 0.173 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.152	α = 90
b = 83.924	β = 90
c = 96.069	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2017-10-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-10-25
Type: Initial release
Version 1.1: 2024-03-20
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.