5FKL

TetR(D) H100A mutant in complex with anhydrotetracycline and magnesium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.215 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Modular Organisation of Inducer Recognition and Allostery in the Tetracycline Repressor

Werten, S.Schneider, J.Palm, G.J.Hinrichs, W.

(2016) FEBS J. 283: 2102


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
TETRACYCLINE REPRESSOR, CLASS D
A
207Escherichia coliMutation(s): 1 
Gene Names: tetR
Find proteins for P0ACT4 (Escherichia coli)
Go to UniProtKB:  P0ACT4
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CL
Query on CL

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Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
TDC
Query on TDC

Download SDF File 
Download CCD File 
A
5A,6-ANHYDROTETRACYCLINE
C22 H22 N2 O7
CXCVEERYMJZMMM-DOCRCCHOSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.215 
  • Space Group: I 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 66.557α = 90.00
b = 66.557β = 90.00
c = 179.681γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
HKL-2000data scaling
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-04-06
    Type: Initial release
  • Version 1.1: 2016-04-13
    Type: Database references
  • Version 1.2: 2016-06-15
    Type: Database references