5EG0

HOXB13-MEIS1 heterodimer bound to DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.101 Å
  • R-Value Free: 0.322 
  • R-Value Work: 0.285 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Molecular basis of recognition of two distinct DNA sequences by a single transcription factor

Morgunova, E.Yin, Y.Jolma, A.Popov, A.Taipale, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Homeobox protein Meis2
A
57Homo sapiensMutation(s): 0 
Gene Names: MEIS2 (MRG1)
Find proteins for O14770 (Homo sapiens)
Go to Gene View: MEIS2
Go to UniProtKB:  O14770
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Homeobox protein Hox-B13
B
61Homo sapiensMutation(s): 0 
Gene Names: HOXB13
Find proteins for Q92826 (Homo sapiens)
Go to Gene View: HOXB13
Go to UniProtKB:  Q92826
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(P*GP*TP*TP*GP*AP*CP*AP*GP*TP*TP*TP*TP*AP*CP*GP*AP*GP*G)-3')D18synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(*CP*CP*TP*CP*GP*TP*AP*AP*AP*AP*CP*TP*GP*TP*CP*AP*AP*C)-3')E18synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.101 Å
  • R-Value Free: 0.322 
  • R-Value Work: 0.285 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 41.726α = 90.00
b = 56.332β = 90.00
c = 115.152γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
PHASERphasing
XDSdata reduction
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-11-09
    Type: Initial release