5D66

Crystal structure of an ankyrin repeat domain (ABAYE2397) from Acinetobacter baumannii AYE at 1.00 A resolution

• PDB DOI: https://doi.org/10.2210/pdb5D66/pdb

• Classification: Structural Genomics, Unknown Function
• Organism(s): Acinetobacter baumannii AYE
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2015-08-11 Released: 2015-09-02 
• Deposition Author(s): Joint Center for Structural Genomics (JCSG)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.00 Å
• R-Value Free: 0.168 
• R-Value Work: 0.139 
• R-Value Observed: 0.140 

Literature

Crystal structure of an ankyrin repeat domain (ABAYE2397) from Acinetobacter baumannii AYE at 1.00 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 43.32 kDa 
• Atom Count: 3,972 
• Modelled Residue Count: 392 
• Deposited Residue Count: 396 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B	198	Acinetobacter baumannii AYE	Mutation(s): 0  Gene Names: ABAYE2397

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CL	C [auth A], D [auth A], E [auth A], F [auth B], G [auth B], H [auth B]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.00 Å
• R-Value Free: 0.168 
• R-Value Work: 0.139 
• R-Value Observed: 0.140 
• Space Group: P 1
• Diffraction Data: https://doi.org/10.18430/M35D66

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.268	α = 83.85
b = 43.221	β = 89.96
c = 49.632	γ = 78.38

Software Package:

Software Name	Purpose
PDB_EXTRACT	data extraction
MOSFLM	data reduction
SCALA	data scaling
SHELX	phasing
SHARP	phasing
REFMAC	refinement
SHELXD	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-09-02 
Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Revision History  

• Version 1.0: 2015-09-02
  Type: Initial release
  
• Version 1.1: 2018-01-24
  Changes: Database references, Derived calculations
• Version 1.2: 2023-02-01
  Changes: Database references
• Version 1.3: 2024-11-13
  Changes: Data collection, Structure summary