5CFC

Crystal Structure of Human Cardiovirus SAFV-3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Work: 0.220 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3.

Mullapudi, E.Novacek, J.Palkova, L.Kulich, P.Lindberg, A.M.van Kuppeveld, F.J.Plevka, P.

(2016) J.Virol. 90: 7628-7639


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VP1
A
252Saffold virusMutation(s): 0 
Find proteins for C0MHL9 (Saffold virus)
Go to UniProtKB:  C0MHL9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
VP3
B
232Saffold virusMutation(s): 0 
Find proteins for E3TMG8 (Saffold virus)
Go to UniProtKB:  E3TMG8
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
VP2
C
258Saffold virusMutation(s): 0 
Find proteins for C0MHL9 (Saffold virus)
Go to UniProtKB:  C0MHL9
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
VP4
D
24Saffold virusMutation(s): 0 
Gene Names: gp1
Find proteins for C3U5A3 (Saffold virus)
Go to UniProtKB:  C3U5A3
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Work: 0.220 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 300.502α = 90.00
b = 300.502β = 90.00
c = 722.103γ = 120.00
Software Package:
Software NamePurpose
CNSphasing
CNSrefinement
XDSdata reduction
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-06-15
    Type: Initial release
  • Version 1.1: 2016-06-22
    Type: Database references
  • Version 1.2: 2016-08-24
    Type: Database references
  • Version 1.3: 2018-04-11
    Type: Data collection, Source and taxonomy, Structure summary