Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

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Protein Workshop | Ligand Explorer

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 80074.03 
• Atom Count: 1669 
• Residue Count: 684 
• Unique protein chains: 1

5BUO

A receptor molecule

• DOI: 10.2210/pdb5BUO/pdb

• Classification: METAL TRANSPORT
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21


• Deposited: 2015-06-04 Released: 2016-07-13 
• Deposition Author(s): Gao, C., Crespi, G.A.N., Gorman, M.A., Nero, T.L., Parker, M.W., Miles, L.A.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.31 Å
• R-Value Free: 0.241 
• R-Value Work: 0.230 

Literature

NULL

Miles, L.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Amyloid beta A4 protein	A, B	342	Homo sapiens	Mutation(s): 0  Gene Names: APP (A4, AD1)
Find proteins for P05067 (Homo sapiens) Go to Gene View: APP Go to UniProtKB:  P05067

Small Molecules

Ligands 9 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
ZN	A	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
SCN	A	THIOCYANATE ION C N S ZMZDMBWJUHKJPS-UHFFFAOYSA-M
SO4	A	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L
ACT	A	ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M
GOL	A	GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
CA	A	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SGN	A	N,O6-DISULFO-GLUCOSAMINE C6 H13 N O11 S2 DQTRACMFIGDHSN-UKFBFLRUSA-N
MG	A	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N
IDS	A	2-O-sulfo-alpha-L-idopyranuronic acid O2-SULFO-GLUCURONIC ACID C6 H10 O10 S COJBCAMFZDFGFK-VCSGLWQLSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.31 Å
• R-Value Free: 0.241 
• R-Value Work: 0.230 
• Space Group: I 2₁ 2₁ 2₁

Unit Cell:

Length (Å)	Angle (°)
a = 60.410	α = 90.00
b = 103.050	β = 90.00
c = 108.850	γ = 90.00

Software Package:

Software Name	Purpose
SCALA	data scaling
MOLREP	phasing
XDS	data reduction
BUSTER	refinement
Coot	model building

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2015-06-04 
• Released Date: 2016-07-13 
• Deposition Author(s): Gao, C., Crespi, G.A.N., Gorman, M.A., Nero, T.L., Parker, M.W., Miles, L.A.

Revision History 

• Version 1.0: 2016-07-13
  Type: Initial release