5AEK

Crystal structure of the human SENP2 C548S in complex with the human SUMO1 K48M F66W


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.326 
  • R-Value Work: 0.257 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Stepping Back and Forward on Sumo Folding Evolution

Grana-Montes, R.Gallego, P.Espargaro, A.Castillo, V.Torrent, J.Lange, R.Reverter, D.Papaleo, E.Lindorff-Larsend, K.Ventura, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SENTRIN-SPECIFIC PROTEASE 2
A, C, E, G, I, K, M, O, Q, S, U, W
224Homo sapiensMutation(s): 1 
Gene Names: SENP2 (KIAA1331)
EC: 3.4.22.-
Find proteins for Q9HC62 (Homo sapiens)
Go to Gene View: SENP2
Go to UniProtKB:  Q9HC62
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
SMALL UBIQUITIN-RELATED MODIFIER 1
B, D, F, H, J, L, N, P, R, T, V, X
78Homo sapiensMutation(s): 2 
Gene Names: SUMO1 (SMT3C, SMT3H3, UBL1)
Find proteins for P63165 (Homo sapiens)
Go to Gene View: SUMO1
Go to UniProtKB:  P63165
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Free: 0.326 
  • R-Value Work: 0.257 
  • Space Group: P 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 113.721α = 90.00
b = 119.319β = 89.67
c = 199.840γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
MOLREPphasing
XPSdata reduction
CCP4Idata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-01-20
    Type: Initial release
  • Version 1.1: 2019-05-22
    Type: Data collection, Experimental preparation, Other