4ZSE

Crystal structure of EGFR 696-1022 T790M/V948R, crystal form II

• PDB DOI:  https://doi.org/10.2210/pdb4ZSE/pdb

• Classification: TRANSFERASE
• Organism(s): Homo sapiens
• Expression System: Spodoptera frugiperda
• Mutation(s): Yes 


• Deposited: 2015-05-13 Released: 2016-06-15 
• Deposition Author(s): Yan, X.E., Yun, C.H.

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.97 Å
• R-Value Free: 0.213 
• R-Value Work: 0.190 
• R-Value Observed: 0.191 

Literature

Ibrutinib Selectively and Irreversibly Targets EGFR-mutant non-Small Cell Lung Cancer Cells

Wu, H., Wang, A., Zhang, W., Wang, B., Wang, B., Yan, X.E., Chen, C., Hu, C., Ye, Z., Zhao, Z., Wang, L., Li, X., Yu, K., Liu, J., Wu, J., Wang, J., Wang, C., Weisberg, E.L., Liu, J., Gray, N.S., Chen, L., Yun, C.H., Liu, Q.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly 2  

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 153.08 kDa 
• Atom Count: 10,588 
• Modelled Residue Count: 1,208 
• Deposited Residue Count: 1,324 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Epidermal growth factor receptor	A, B, C, D	331	Homo sapiens	Mutation(s): 2  Gene Names: EGFR, ERBB, ERBB1, HER1 EC: 2.7.10.1
UniProt & NIH Common Fund Data Resources
Find proteins for P00533 (Homo sapiens) Explore P00533  Go to UniProtKB:  P00533
PHAROS:  P00533

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ANP	E [auth A], G [auth B], I [auth C], L [auth D]	PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N
EDO	K [auth C]	1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N
MG	F [auth A], H [auth B], J [auth C], M [auth D]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.97 Å
• R-Value Free: 0.213 
• R-Value Work: 0.190 
• R-Value Observed: 0.191 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 71.82	α = 90
b = 102.317	β = 101.24
c = 86.752	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHASER	phasing
HKL-3000	data processing
Coot	model building

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2016-06-15 
Deposition Author(s): Yan, X.E., Yun, C.H.

---

Funding Organization	Location	Grant Number
	China	--

Revision History  

• Version 1.0: 2016-06-15
  Type: Initial release