4TV4 | pdb_00004tv4

Crystal structure of a Putative uncharacterized protein from Burkholderia pseudomallei

PDB DOI: https://doi.org/10.2210/pdb4TV4/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Burkholderia pseudomallei 1710b
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2014-06-25 Released: 2014-07-30
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free:
0.220 (Depositor), 0.223 (DCC)
R-Value Work:
0.181 (Depositor), 0.189 (DCC)
R-Value Observed:
0.183 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 4TV4

This is version 2.1 of the entry. See complete history.

Literature

Crystal structure of a Putative uncharacterized protein from Burkholderia pseudomallei

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Lukacs, C.M., Lorimer, D., Edwards, T.E.

To be published.

Macromolecule Content

Total Structure Weight: 59.65 kDa
Atom Count: 3,401
Modeled Residue Count: 432
Deposited Residue Count: 546
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B, C	182	Burkholderia pseudomallei 1710b	Mutation(s): 0 Gene Names: BURPS1710b_A1693
UniProt
Find proteins for Q3JHV3 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JHV3 Go to UniProtKB: Q3JHV3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q3JHV3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.10 Å
R-Value Free: 0.220 (Depositor), 0.223 (DCC)
R-Value Work: 0.181 (Depositor), 0.189 (DCC)
R-Value Observed: 0.183 (Depositor)

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 86.31	α = 90
b = 147.45	β = 90
c = 45.04	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
XSCALE	data scaling
PHASER	phasing
PDB_EXTRACT	data extraction
PHENIX	refinement

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

Deposition Data

Released Date: 2014-07-30

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2014-07-30
Type: Initial release
Version 2.0: 2017-11-22
Changes: Atomic model, Database references, Derived calculations, Other, Refinement description, Source and taxonomy
Version 2.1: 2023-09-27
Changes: Data collection, Database references, Refinement description

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.