4TV4 | pdb_00004tv4

Crystal structure of a Putative uncharacterized protein from Burkholderia pseudomallei

• PDB DOI: https://doi.org/10.2210/pdb4TV4/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Burkholderia pseudomallei 1710b
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2014-06-25 Released: 2014-07-30 
• Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 
  0.220 (Depositor), 0.220 (DCC) 
• R-Value Work: 
  0.181 (Depositor), 0.190 (DCC) 
• R-Value Observed: 
  0.183 (Depositor) 

Starting Model: experimental

Literature

Crystal structure of a Putative uncharacterized protein from Burkholderia pseudomallei

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Lukacs, C.M., Lorimer, D., Edwards, T.E.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C6  (Explore in 3D)
Global Stoichiometry: Homo 6-mer - A6 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 59.65 kDa 
• Atom Count: 3,401 
• Modeled Residue Count: 432 
• Deposited Residue Count: 546 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein	A, B, C	182	Burkholderia pseudomallei 1710b	Mutation(s): 0  Gene Names: BURPS1710b_A1693
UniProt
Find proteins for Q3JHV3 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JHV3  Go to UniProtKB:  Q3JHV3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free:  0.220 (Depositor), 0.220 (DCC) 
• R-Value Work:  0.181 (Depositor), 0.190 (DCC) 
• R-Value Observed: 0.183 (Depositor) 

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 86.31	α = 90
b = 147.45	β = 90
c = 45.04	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
XSCALE	data scaling
PHASER	phasing
PDB_EXTRACT	data extraction
PHENIX	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2014-07-30 
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History  

• Version 1.0: 2014-07-30
  Type: Initial release
  
• Version 2.0: 2017-11-22
  Changes: Atomic model, Database references, Derived calculations, Other, Refinement description, Source and taxonomy
• Version 2.1: 2023-09-27
  Changes: Data collection, Database references, Refinement description