4MS4
Crystal structure of the extracellular domain of human GABA(B) receptor bound to the agonist baclofen
- PDB DOI: https://doi.org/10.2210/pdb4MS4/pdb
- Classification: SIGNALING PROTEIN/AGONIST
- Organism(s): Homo sapiens
- Expression System: Spodoptera frugiperda
- Mutation(s): No 
- Membrane Protein: Yes  mpstruc
- Deposited: 2013-09-18 Released: 2013-12-11 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.216 
- R-Value Work: 0.190 
- R-Value Observed: 0.191 
This is version 1.4 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Gamma-aminobutyric acid type B receptor subunit 1 | 420 | Homo sapiens | Mutation(s): 0  Gene Names: GABBR1, GPRC3A Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UBS5 (Homo sapiens) Explore Q9UBS5  Go to UniProtKB:  Q9UBS5 | |||||
PHAROS:  Q9UBS5 GTEx:  ENSG00000204681  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9UBS5 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Gamma-aminobutyric acid type B receptor subunit 2 | 433 | Homo sapiens | Mutation(s): 0  Gene Names: GABBR2, GPR51, GPRC3B Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O75899 (Homo sapiens) Explore O75899  Go to UniProtKB:  O75899 | |||||
PHAROS:  O75899 GTEx:  ENSG00000136928  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O75899 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | D [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
2C0 Query on 2C0 | C [auth A] | baclofen C10 H12 Cl N O2 KPYSYYIEGFHWSV-QMMMGPOBSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.216 
- R-Value Work: 0.190 
- R-Value Observed: 0.191 
- Space Group: P 21 21 2
- Diffraction Data: https://doi.org/10.15785/SBGRID/58
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 115.383 | α = 90 |
b = 140.39 | β = 90 |
c = 59.501 | γ = 90 |
Software Name | Purpose |
---|---|
SCALEPACK | data scaling |
BUSTER-TNT | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |
DENZO | data reduction |
PHASER | phasing |
BUSTER | refinement |
Entry History 
Deposition Data
- Released Date: 2013-12-11  Deposition Author(s): Geng, Y., Bush, M., Mosyak, L., Wang, F., Fan, Q.R.
Revision History (Full details and data files)
- Version 1.0: 2013-12-11
Type: Initial release - Version 1.1: 2013-12-18
Changes: Database references - Version 1.2: 2014-02-05
Changes: Database references - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Database references, Derived calculations, Structure summary - Version 1.4: 2023-09-20
Changes: Data collection, Database references, Refinement description, Structure summary