4WZM

Mutant K18E of RNA dependent RNA polymerase from Foot-and-Mouth Disease Virus complexed with RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.52 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.224 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.

Ferrer-Orta, C.de la Higuera, I.Caridi, F.Sanchez-Aparicio, M.T.Moreno, E.Perales, C.Singh, K.Sarafianos, S.G.Sobrino, F.Domingo, E.Verdaguer, N.

(2015) J.Virol. 89: 6848-6859


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA dependent RNA polymerase
A
481Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C)Mutation(s): 1 
Find proteins for P03311 (Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C))
Go to UniProtKB:  P03311
Entity ID: 2
MoleculeChainsLengthOrganism
RNA templateB8synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
RNA primerC7synthetic construct
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
ACT
Query on ACT

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Download CCD File 
A
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.52 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.224 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 94.306α = 90.00
b = 94.306β = 90.00
c = 100.815γ = 120.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
REFMACphasing
SCALAdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-05-06
    Type: Initial release
  • Version 1.1: 2015-05-13
    Type: Database references
  • Version 1.2: 2015-06-17
    Type: Database references