4WHT

Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P1 crystal form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.22 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structural flexibility of a conserved antigenic region in hepatitis C virus glycoprotein e2 recognized by broadly neutralizing antibodies.

Meola, A.Tarr, A.W.England, P.Meredith, L.W.McClure, C.P.Foung, S.K.McKeating, J.A.Ball, J.K.Rey, F.A.Krey, T.

(2015) J.Virol. 89: 2170-2181


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Heavy chain of the Fab fragment derived from neutralizing antibody 3/11
A, C, E, G, I, K, M, O, Q, S, U, X
252N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Light chain of the Fab fragment derived from neutralizing antibody 3/11
J, B, D, F, H, L, N, P, R, T, V, Y
220N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Epitope peptide
a, c, e, g, i, k, m, o, q, s, u, x
12Hepacivirus CMutation(s): 0 
Find proteins for Q9WJJ4 (Hepacivirus C)
Go to UniProtKB:  Q9WJJ4
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.22 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.209 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 64.794α = 88.79
b = 128.225β = 94.36
c = 163.626γ = 96.15
Software Package:
Software NamePurpose
PHASERphasing
XSCALEdata scaling
XSCALEdata reduction
BUSTERrefinement
XDSdata reduction
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2014-09-23 
  • Released Date: 2014-12-17 
  • Deposition Author(s): Krey, T., Rey, F.A.

Funding OrganizationLocationGrant Number
ANRSFrance--

Revision History 

  • Version 1.0: 2014-12-17
    Type: Initial release
  • Version 1.1: 2015-02-04
    Type: Database references