4WAV

Crystal Structure of Haloquadratum walsbyi bacteriorhodopsin mutant D93N


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of an acid-tolerant light-driven proton pump at 1.85 Angstroms resolution

Hsu, M.F.Fu, H.Y.Cai, C.J.Yi, S.P.Yang, C.S.Wang, A.H.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Bacteriorhodopsin-I
A, B
262Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23)Mutation(s): 1 
Gene Names: bop1
Find proteins for G0LFX8 (Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23))
Go to UniProtKB:  G0LFX8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
RET
Query on RET

Download SDF File 
Download CCD File 
A, B
RETINAL
C20 H28 O
NCYCYZXNIZJOKI-OVSJKPMPSA-N
 Ligand Interaction
MPG
Query on MPG

Download SDF File 
Download CCD File 
A
[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
C21 H40 O4
JPJYKWFFJCWMPK-GDCKJWNLSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.182 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 29.860α = 90.00
b = 131.942β = 90.00
c = 235.423γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
Blu-Icedata reduction
PDB_EXTRACTdata extraction
HKL-2000data scaling
MOLREPphasing
HKLdata reduction
HKLdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science CouncilTaiwanNSC 102-2319-B-001-003

Revision History 

  • Version 1.0: 2015-09-23
    Type: Initial release