4V8M

High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.57 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 3.3 of the entry. See complete history


Literature

High-Resolution Cryo-Electron Microscopy Structure of the Trypanosoma Brucei Ribosome.

Hashem, Y.Des Georges, A.Fu, J.Buss, S.N.Jossinet, F.Jobe, A.Zhang, Q.Liao, H.Y.Grassucci, R.A.Bajaj, C.Westhof, E.Madison-Antenucci, S.Frank, J.

(2013) Nature 494: 385

  • DOI: 10.1038/nature11872
  • Primary Citation of Related Structures:  
    4V8M

  • PubMed Abstract: 
  • Ribosomes, the protein factories of living cells, translate genetic information carried by messenger RNAs into proteins, and are thus involved in virtually all aspects of cellular development and maintenance. The few available structures of the eukar ...

    Ribosomes, the protein factories of living cells, translate genetic information carried by messenger RNAs into proteins, and are thus involved in virtually all aspects of cellular development and maintenance. The few available structures of the eukaryotic ribosome reveal that it is more complex than its prokaryotic counterpart, owing mainly to the presence of eukaryote-specific ribosomal proteins and additional ribosomal RNA insertions, called expansion segments. The structures also differ among species, partly in the size and arrangement of these expansion segments. Such differences are extreme in kinetoplastids, unicellular eukaryotic parasites often infectious to humans. Here we present a high-resolution cryo-electron microscopy structure of the ribosome of Trypanosoma brucei, the parasite that is transmitted by the tsetse fly and that causes African sleeping sickness. The atomic model reveals the unique features of this ribosome, characterized mainly by the presence of unusually large expansion segments and ribosomal-protein extensions leading to the formation of four additional inter-subunit bridges. We also find additional rRNA insertions, including one large rRNA domain that is not found in other eukaryotes. Furthermore, the structure reveals the five cleavage sites of the kinetoplastid large ribosomal subunit (LSU) rRNA chain, which is known to be cleaved uniquely into six pieces, and suggests that the cleavage is important for the maintenance of the T. brucei ribosome in the observed structure. We discuss several possible implications of the large rRNA expansion segments for the translation-regulation process. The structure could serve as a basis for future experiments aimed at understanding the functional importance of these kinetoplastid-specific ribosomal features in protein-translation regulation, an essential step towards finding effective and safe kinetoplastid-specific drugs.


    Organizational Affiliation

    Howard Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York 10032, USA.



Macromolecules

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Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S10, PUTATIVEAD172Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.1670
Find proteins for Q38B66 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S13, PUTATIVEAG151Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.61.1390Tb927.2.5910
Find proteins for Q586C2 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S15, PUTATIVEAI152Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.2340Tb927.7.2370
Find proteins for Q57XN7 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S15A, PUTATIVEAJ130Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.4000Tb927.3.4360
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Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S16, PUTATIVEAK149Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.1040Tb927.7.1050
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Entity ID: 20
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S17, PUTATIVEAL142Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.3675Tb11.01.3676
Find proteins for Q382Z8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 22
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN S19, PUTATIVEAO167Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.4.1860
Find proteins for Q583K7 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 24
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN S20, PUTATIVEAQ117Trypanosoma brucei brucei TREU927Mutation(s): 0 
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Entity ID: 28
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40S RIBOSOMAL PROTEIN S25, PUTATIVEAU113Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.4800Tb927.3.1370
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Entity ID: 43
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEINBJ214Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.05.0220Tb11.01.1470
Find proteins for Q383V8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 44
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L10, PUTATIVEBK213Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.0110Tb09.211.0340
Find proteins for Q38EC5 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 46
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L12, PUTATIVEBM164Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.8.6030
Find proteins for Q57YK4 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 49
MoleculeChainsSequence LengthOrganismDetailsImage
PROBABLE 60S RIBOSOMAL PROTEIN L14BP189Trypanosoma brucei brucei TREU927Mutation(s): 0 
Find proteins for P55842 (Trypanosoma brucei brucei)
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Entity ID: 69
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L34, PUTATIVEBj170Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.1480
Find proteins for Q383V6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 73
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L37Bn84Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.0865Tb11.02.0500
Find proteins for Q386L1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 74
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60S RIBOSOMAL PROTEIN L37A, PUTATIVEBo93Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.100.0110Tb10.70.0465
Find proteins for Q38AW9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 81
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60S RIBOSOMAL PROTEIN L6, PUTATIVEBv192Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.26.0560
Find proteins for Q389K1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 1
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40S RIBOSOMAL PROTEIN S3A, PUTATIVEA0256Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.3360
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Entity ID: 10
MoleculeChainsSequence LengthOrganismDetailsImage
UBIQUITIN/RIBOSOMAL PROTEIN S27A, PUTATIVEA9153Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.3680
Find proteins for Q57WI3 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 11
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40S RIBOSOMAL PROTEIN SA, PUTATIVEAC277Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.2680
Find proteins for Q383I8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEINS S11, PUTATIVEAE174Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.7695
Find proteins for Q38CI4 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S12AF144Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.1830
Find proteins for Q385Y8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S14AH144Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.0290Tb11.0390Tb927.6.4980
Find proteins for Q4FKG9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S4, PUTATIVEA1273Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.1085Tb11.02.1090
Find proteins for Q386F2 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 21
MoleculeChainsSequence LengthOrganismDetailsImage
40S RIBOSOMAL PROTEIN S18, PUTATIVEAM153Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.1730Tb10.70.1740
Find proteins for Q38B69 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 23
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40S RIBOSOMAL PROTEIN S2, PUTATIVEAP266Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.61.1960Tb10.61.2070
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Entity ID: 25
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40S RIBOSOMAL PROTEIN S21, PUTATIVEAR194Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.4360
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Entity ID: 26
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40S RIBOSOMAL PROTEIN S23, PUTATIVEAS143Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.7020Tb10.70.7030
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Entity ID: 27
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40S RIBOSOMAL PROTEIN S24AT137Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.6k15.3340Tb10.6k15.3350
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Entity ID: 29
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RIBOSOMAL PROTEIN S26, PUTATIVEAV111Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.0355
Find proteins for Q384J9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 3
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40S RIBOSOMAL PROTEIN S5, PUTATIVEA2190Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.4170
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Entity ID: 30
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40S RIBOSOMAL PROTEIN S27, PUTATIVEAW86Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.1475
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Entity ID: 31
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40S RIBOSOMAL PROTEIN S3, PUTATIVEAX214Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.26.0370
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Entity ID: 32
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40S RIBOSOMAL PROTEIN S30, PUTATIVEAY66Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.6.2110
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Entity ID: 33
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40S RIBOSOMAL PROTEIN S33, PUTATIVEAZ103Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.230Tb927.7.240
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Entity ID: 4
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40S RIBOSOMAL PROTEIN S6A3250Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.100.0080
Find proteins for Q38CL9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 42
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60S RIBOSOMAL PROTEIN L18BI193Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: RPL18-ATb10.6k15.0410RPL18-BTb11.02.1840
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Entity ID: 45
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60S RIBOSOMAL PROTEIN L11, PUTATIVEBL194Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.160.5580Tb09.160.5590
Find proteins for Q38EI9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 47
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60S RIBOSOMAL PROTEIN L13BN218Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.3.3320
Find proteins for Q57V54 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 48
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60S RIBOSOMAL PROTEIN L13A, PUTATIVEBO222Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.4.3550Tb927.5.1610
Find proteins for Q585J5 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 5
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RIBOSOMAL PROTEIN S7, PUTATIVEA4202Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.160.2550
Find proteins for Q38FD9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 50
MoleculeChainsSequence LengthOrganismDetailsImage
RIBOSOMAL PROTEIN L15BQ221Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.244.2720
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Entity ID: 51
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60S RIBOSOMAL PROTEIN L17, PUTATIVEBR166Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.61.2090Tb11.02.2430
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Entity ID: 52
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60S RIBOSOMAL PROTEIN L18ABS179Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.3510Tb11.01.5720
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Entity ID: 53
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60S RIBOSOMAL PROTEIN L19, PUTATIVEBT260Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.5000Tb927.7.5020
Find proteins for Q57ZI7 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 54
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60S RIBOSOMAL PROTEIN L21E, PUTATIVEBU159Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.0880Tb11.50.0005
Find proteins for Q4FKD4 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 55
MoleculeChainsSequence LengthOrganismDetailsImage
60S RIBOSOMAL PROTEIN L22, PUTATIVEBV130Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.1920
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Entity ID: 56
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60S RIBOSOMAL PROTEIN L23, PUTATIVEBW139Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.2630Tb09.211.2640
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Entity ID: 57
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60S RIBOSOMAL PROTEIN L23ABX164Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.5170
Find proteins for Q57ZH2 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 58
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60S RIBOSOMAL PROTEIN L24, PUTATIVEBY125Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.1540
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Entity ID: 59
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60S RIBOSOMAL PROTEIN L26, PUTATIVEBZ143Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.4850
Find proteins for Q38D25 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 6
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40S RIBOSOMAL PROTEIN S8A5220Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.8.6150Tb927.8.6160
Find proteins for Q57YL6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 60
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60S RIBOSOMAL PROTEIN L27, PUTATIVEBa133Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.7535Tb11.01.7545
Find proteins for Q381J6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 61
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60S RIBOSOMAL PROTEIN L27ABb145Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.2650Tb09.v1.0640
Find proteins for Q38DN9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 62
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60S RIBOSOMAL PROTEIN L28, PUTATIVEBc146Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.4050Tb11.02.4070
Find proteins for Q385E9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 63
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60S RIBOSOMAL PROTEIN L29, PUTATIVEBd71Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.1790
Find proteins for Q383S6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 64
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60S RIBOSOMAL PROTEIN L2, PUTATIVEBe260Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.7960Tb927.5.1110
Find proteins for Q57W56 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 65
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RIBOSOMAL PROTEIN L3, MITOCHONDRIAL, PUTATIVEBf429Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.4.1800
Find proteins for Q581Q1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 66
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60S RIBOSOMAL PROTEIN L30Bg105Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.3170
Find proteins for Q38BI9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 67
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60S RIBOSOMAL SUBUNIT PROTEIN L31, PUTATIVEBh188Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.211.3270Tb09.211.3280
Find proteins for Q38DH8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 68
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60S RIBOSOMAL PROTEIN L32, PUTATIVEBi132Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.100.0155
Find proteins for Q38CL1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 7
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40S RIBOSOMAL PROTEIN S9, PUTATIVEA6190Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.1380Tb927.8.1110
Find proteins for Q57VP3 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 70
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60S RIBOSOMAL PROTEIN L35, PUTATIVEBk127Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.160.0700Tb09.160.0710
Find proteins for Q38FW8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 71
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60S RIBOSOMAL PROTEIN L35A, PUTATIVEBl149Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.4.2180
Find proteins for Q584G9 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 72
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RIBOSOMAL PROTEIN L36, PUTATIVEBm109Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.244.2725
Find proteins for Q38CY6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 75
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60S RIBOSOMAL PROTEIN L38, PUTATIVEBp82Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.160.0815
Find proteins for Q38FV6 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 76
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60S RIBOSOMAL PROTEIN L39, PUTATIVEBq51Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.8.5260
Find proteins for Q57UJ8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 77
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60S RIBOSOMAL PROTEIN L4Br374Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.3.5050
Find proteins for Q582N2 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 78
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UBIQUITIN-60S RIBOSOMAL PROTEIN L40Bs128Trypanosoma brucei brucei TREU927Mutation(s): 0 
Find proteins for P21899 (Trypanosoma brucei brucei)
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Entity ID: 79
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60S RIBOSOMAL PROTEIN L44Bt106Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.02.0740Tb927.2.6090
Find proteins for D7SG81 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 8
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GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEINA7318Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb11.01.3170Tb11.01.3180
Find proteins for Q383E1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 80
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60S RIBOSOMAL PROTEIN L5, PUTATIVEBu308Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb09.244.2730Tb09.244.2740
Find proteins for Q38CY8 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 82
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60S RIBOSOMAL PROTEIN L7, PUTATIVEBw257Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.7.1740Tb927.7.1750
Find proteins for Q57V35 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 83
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60S RIBOSOMAL PROTEIN L7A, PUTATIVEBx276Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb927.8.1330Tb927.8.1340
Find proteins for Q57VM1 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 84
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60S RIBOSOMAL PROTEIN L9, PUTATIVEBy189Trypanosoma brucei brucei TREU927Mutation(s): 0 
Gene Names: Tb10.70.7010
Find proteins for Q38CD0 (Trypanosoma brucei brucei (strain 927/4 GUTat10.1))
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Entity ID: 9
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RIBOSOMAL PROTEIN S29, PUTATIVEA857Trypanosoma brucei brucei TREU927Mutation(s): 0 
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Entity ID: 35
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BETA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT 28S RRNABB1465Trypanosoma brucei
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Entity ID: 41
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SHORT RRNA-IV OF THE LARGE RIBOSOMAL SUBUNITBH135Trypanosoma brucei
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Entity ID: 86
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E-SITE TRNAAB73Trypanosoma brucei
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Entity ID: 34
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ALPHA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT 28S RRNABA1847Trypanosoma brucei
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Entity ID: 36
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5.8S RRNA CHAIN OF THE LARGE RIBOSOMAL SUBUNITBC169Trypanosoma brucei
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Entity ID: 37
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5S RRNA CHAIN OF THE LARGE RIBOSOMAL SUBUNITBD119Trypanosoma brucei
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Entity ID: 38
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SHORT RRNA-I OF THE LARGE RIBOSOMAL SUBUNITBE210Trypanosoma brucei
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Entity ID: 39
MoleculeChainsLengthOrganismImage
SHORT RRNA-II OF THE LARGE RIBOSOMAL SUBUNITBF73Trypanosoma brucei
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Entity ID: 40
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SHORT RRNA-III OF THE LARGE RIBOSOMAL SUBUNITBG182Trypanosoma brucei
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Entity ID: 85
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18S RRNA OF THE SMALL RIBOSOMAL SUBUNITAA2251Trypanosoma brucei
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.57 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-09
    Type: Initial release
  • Version 1.1: 2014-12-10
    Changes: Other
  • Version 1.2: 2015-04-22
    Changes: Other
  • Version 2.0: 2017-08-02
    Changes: Advisory, Atomic model, Data collection, Derived calculations
  • Version 3.0: 2019-07-31
    Changes: Advisory, Data collection, Database references, Derived calculations, Non-polymer description, Other, Structure summary
  • Version 3.1: 2019-08-21
    Changes: Data collection, Database references
  • Version 3.2: 2019-10-23
    Changes: Data collection, Database references
  • Version 3.3: 2019-12-11
    Changes: Other