4V8M | pdb_00004v8m

High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth A0]SCOP2 FamilyRibosomal S3Ae 8048450 4006095 SCOP2 (2022-06-29)
A [auth A0]SCOP2 SuperfamilyRibosomal S3Ae-like 8053205 3002166 SCOP2 (2022-06-29)
B [auth A1]SCOP2 FamilyRibosomal protein S4e, C-terminal KOW domain-like 8044899 4004197 SCOP2 (2022-06-29)
B [auth A1]SCOP2 FamilyCold shock DNA-binding domain-like 8048389 4001909 SCOP2 (2022-06-29)
B [auth A1]SCOP2 FamilyEukaryotic ribosomal protein S4e-like 8050327 4006847 SCOP2 (2022-06-29)
B [auth A1]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052769 3000334 SCOP2 (2022-06-29)
B [auth A1]SCOP2 SuperfamilyNucleic acid-binding proteins 8052768 3000135 SCOP2 (2022-06-29)
B [auth A1]SCOP2 SuperfamilyAlpha-L RNA-binding motif 8052767 3001473 SCOP2 (2022-06-29)
C [auth A2]SCOP2 FamilyRibosomal protein S7 8066014 4001112 SCOP2 (2022-06-29)
C [auth A2]SCOP2 SuperfamilyRibosomal protein S7 8066015 3000799 SCOP2 (2022-06-29)
D [auth A3]SCOP2 FamilyRibosomal protein S6e 8048562 4006143 SCOP2 (2022-06-29)
D [auth A3]SCOP2 SuperfamilyGS N-terminal domain-like 8053164 3000408 SCOP2 (2022-06-29)
F [auth A5]SCOP2 FamilyRibosomal protein S8e 8048718 4006189 SCOP2 (2022-06-29)
F [auth A5]SCOP2 Superfamily50S Ribosomal protein L14-like 8053073 3000433 SCOP2 (2022-06-29)
K [auth AC]SCOP2 FamilyRibosomal protein S2-like 8063811 4003744 SCOP2 (2022-06-29)
K [auth AC]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8063812 3001397 SCOP2 (2022-06-29)
L [auth AD]SCOP2 FamilyeS10-like 8051607 4007434 SCOP2 (2022-06-29)
L [auth AD]SCOP2 SuperfamilyWinged helix DNA-binding domain 8055706 3000034 SCOP2 (2022-06-29)
M [auth AE]SCOP2 FamilyRibosomal S17 N-terminal domain-like 8045084 4004290 SCOP2 (2022-06-29)
M [auth AE]SCOP2 FamilyCold shock DNA-binding domain-like 8052728 4001909 SCOP2 (2022-06-29)
M [auth AE]SCOP2 SuperfamilyRibosomal S17 N-terminal domain-like 8052727 3002138 SCOP2 (2022-06-29)
M [auth AE]SCOP2 SuperfamilyNucleic acid-binding proteins 8052729 3000135 SCOP2 (2022-06-29)
N [auth AF]SCOP2 FamilyL30e/L7ae ribosomal proteins 8063969 4001513 SCOP2 (2022-06-29)
N [auth AF]SCOP2 SuperfamilyL30e-like 8063970 3001739 SCOP2 (2022-06-29)
O [auth AG]SCOP2 Family40S Ribosomal protein S13, N-terminal domain-like 8050314 4006843 SCOP2 (2022-06-29)
O [auth AG]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S13 8052951 4000767 SCOP2 (2022-06-29)
O [auth AG]SCOP2 SuperfamilyHomeodomain-like 8052952 3000001 SCOP2 (2022-06-29)
O [auth AG]SCOP2 SuperfamilyS15/NS1 RNA-binding domain 8052953 3001284 SCOP2 (2022-06-29)
P [auth AH]SCOP2 FamilyRibosomal protein L18p and S11 8099491 4000555 SCOP2 (2022-06-29)
P [auth AH]SCOP2 SuperfamilyTranslational machinery components 8099492 3000571 SCOP2 (2022-06-29)
R [auth AJ]SCOP2 FamilyRibosomal protein S8 8081972 4002027 SCOP2 (2022-06-29)
R [auth AJ]SCOP2 SuperfamilyRibosomal protein S8 8081973 3000709 SCOP2 (2022-06-29)
U [auth AM]SCOP2 FamilyRibosomal protein S13 8101618 4000260 SCOP2 (2022-06-29)
U [auth AM]SCOP2 SuperfamilyS13-like H2TH domain 8101619 3000053 SCOP2 (2022-06-29)
Y [auth AR]SCOP2 FamilyRibosomal protein S21e 8048782 4006215 SCOP2 (2022-06-29)
Y [auth AR]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053133 3000068 SCOP2 (2022-06-29)
BA [auth AU]SCOP2 FamilyRibosomal protein S25-like 8051329 4007308 SCOP2 (2022-06-29)
BA [auth AU]SCOP2 SuperfamilyWinged helix DNA-binding domain 8090998 3000034 SCOP2 (2022-06-29)
CA [auth AV]SCOP2 FamilyRibosomal protein S26e 8048844 4006236 SCOP2 (2022-06-29)
CA [auth AV]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053142 3000068 SCOP2 (2022-06-29)
FA [auth AY]SCOP2 FamilyRibosomal protein S30e-like 8046414 4005067 SCOP2 (2022-06-29)
FA [auth AY]SCOP2 SuperfamilyRibosomal protein S30e-like 8053450 3002190 SCOP2 (2022-06-29)
GA [auth AZ]SCOP2 FamilyCold shock DNA-binding domain-like 8063435 4001909 SCOP2 (2022-06-29)
GA [auth AZ]SCOP2 SuperfamilyNucleic acid-binding proteins 8063436 3000135 SCOP2 (2022-06-29)
PA [auth BI]SCOP2 FamilyRibosomal proteins L15p and L18e 8046505 4003555 SCOP2 (2022-06-29)
PA [auth BI]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8095971 3001045 SCOP2 (2022-06-29)
QA [auth BJ]SCOP2 FamilyRibosomal protein L1p/L10e-like 8065341 4002929 SCOP2 (2022-06-29)
QA [auth BJ]SCOP2 SuperfamilyRibosomal protein L1p/L10e-like 8065342 3001911 SCOP2 (2022-06-29)
RA [auth BK]SCOP2 FamilyRibosomal protein L10e 8099387 4001135 SCOP2 (2022-06-29)
RA [auth BK]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8099388 3000884 SCOP2 (2022-06-29)
SA [auth BL]SCOP2 FamilyRibosomal protein L5 8077506 4001498 SCOP2 (2022-06-29)
SA [auth BL]SCOP2 SuperfamilyRL5-like 8077507 3001709 SCOP2 (2022-06-29)
UA [auth BN]SCOP2 FamilyRibosomal protein L13e 8048854 4006241 SCOP2 (2022-06-29)
UA [auth BN]SCOP2 SuperfamilyRibosomal protein L13e-like 8053158 3002162 SCOP2 (2022-06-29)
XA [auth BQ]SCOP2 FamilyL15e 8082490 4000945 SCOP2 (2022-06-29)
XA [auth BQ]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8082491 3000210 SCOP2 (2022-06-29)
YA [auth BR]SCOP2 FamilyRibosomal protein L22 8076713 4001212 SCOP2 (2022-06-29)
YA [auth BR]SCOP2 SuperfamilyRibosomal protein L22 8076714 3001078 SCOP2 (2022-06-29)
AB [auth BT]SCOP2 FamilyRibosomal protein L19 (L19e) 8106295 4001138 SCOP2 (2022-06-29)
AB [auth BT]SCOP2 SuperfamilyRibosomal protein L19 (L19e) 8106296 3000890 SCOP2 (2022-06-29)
CB [auth BV]SCOP2 Family60S Ribosomal protein L22e 8049496 4006528 SCOP2 (2022-06-29)
CB [auth BV]SCOP2 Superfamily60S Ribosomal protein L22e 8053057 3002158 SCOP2 (2022-06-29)
DB [auth BW]SCOP2 FamilyRibosomal protein L14 8072051 4001826 SCOP2 (2022-06-29)
DB [auth BW]SCOP2 Superfamily50S Ribosomal protein L14-like 8072052 3000433 SCOP2 (2022-06-29)
EB [auth BX]SCOP2 FamilyL23p 8061165 4000943 SCOP2 (2022-06-29)
EB [auth BX]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8077085 3000210 SCOP2 (2022-06-29)
GB [auth BZ]SCOP2 FamilyRibosomal proteins L24p and L21e 8076747 4001752 SCOP2 (2022-06-29)
GB [auth BZ]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076748 3000334 SCOP2 (2022-06-29)
HB [auth Ba]SCOP2 FamilyRibosomal protein L27e 8049502 4006529 SCOP2 (2022-06-29)
HB [auth Ba]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053048 3000334 SCOP2 (2022-06-29)
IB [auth Bb]SCOP2 FamilyRibosomal proteins L15p and L18e 8099385 4003555 SCOP2 (2022-06-29)
IB [auth Bb]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8099386 3001045 SCOP2 (2022-06-29)
KB [auth Bd]SCOP2 FamilyRibosomal protein L29e 8049524 4006531 SCOP2 (2022-06-29)
KB [auth Bd]SCOP2 SuperfamilyRibosomal protein L29e 8053040 3002157 SCOP2 (2022-06-29)
MB [auth Bf]SCOP2 FamilyRibosomal protein L3 8099559 4002103 SCOP2 (2022-06-29)
MB [auth Bf]SCOP2 SuperfamilyTranslational proteins 8099560 3000811 SCOP2 (2022-06-29)
NB [auth Bg]SCOP2 FamilyL30e/L7ae ribosomal proteins 8099383 4001513 SCOP2 (2022-06-29)
NB [auth Bg]SCOP2 SuperfamilyL30e-like 8099384 3001739 SCOP2 (2022-06-29)
PB [auth Bi]SCOP2 FamilyRibosomal protein L32e 8102448 4003517 SCOP2 (2022-06-29)
PB [auth Bi]SCOP2 SuperfamilyRibosomal protein L32e 8102449 3000982 SCOP2 (2022-06-29)
QB [auth Bj]SCOP2 FamilyRibosomal protein L34e-like 8048732 4006193 SCOP2 (2022-06-29)
QB [auth Bj]SCOP2 SuperfamilyRibosomal protein L34e-like 8053536 3002203 SCOP2 (2022-06-29)
SB [auth Bl]SCOP2 FamilyRibosomal protein L35ae 8099563 4003173 SCOP2 (2022-06-29)
SB [auth Bl]SCOP2 SuperfamilyTranslational proteins 8099564 3000811 SCOP2 (2022-06-29)
TB [auth Bm]SCOP2 FamilyRibosomal protein L36e 8048630 4006168 SCOP2 (2022-06-29)
TB [auth Bm]SCOP2 SuperfamilyRibosomal protein L36e 8053121 3002161 SCOP2 (2022-06-29)
VB [auth Bo]SCOP2 FamilyRibosomal protein L37ae 8101616 4003704 SCOP2 (2022-06-29)
VB [auth Bo]SCOP2 SuperfamilyZn-binding ribosomal proteins 8101617 3001320 SCOP2 (2022-06-29)
WB [auth Bp]SCOP2 FamilyRibosomal L38e protein-like 8049533 4006532 SCOP2 (2022-06-29)
WB [auth Bp]SCOP2 SuperfamilyRibosomal L38e protein-like 8053565 3002206 SCOP2 (2022-06-29)
XB [auth Bq]SCOP2 Familyribosomal protein l39e 8099553 4001518 SCOP2 (2022-06-29)
XB [auth Bq]SCOP2 SuperfamilyRibosomal protein L39e 8099554 3001756 SCOP2 (2022-06-29)
YB [auth Br]SCOP2 Family60S ribosomal protein L4 C-terminal domain-like 8049950 4006700 SCOP2 (2022-06-29)
YB [auth Br]SCOP2 FamilyRibosomal protein L4 8052836 4003628 SCOP2 (2022-06-29)
YB [auth Br]SCOP2 Superfamily60S ribosomal protein L4 C-terminal domain-like 8052837 3002143 SCOP2 (2022-06-29)
YB [auth Br]SCOP2 SuperfamilyRibosomal protein L4 8052838 3001146 SCOP2 (2022-06-29)
ZB [auth Bs]SCOP2 FamilyRibosomal protein L40e 8098577 4002847 SCOP2 (2022-06-29)
ZB [auth Bs]SCOP2 SuperfamilyZn-binding ribosomal proteins 8098578 3001320 SCOP2 (2022-06-29)
BC [auth Bu]SCOP2 FamilyRibosomal protein L5e and archael L18-like 8049684 4006591 SCOP2 (2022-06-29)
BC [auth Bu]SCOP2 SuperfamilyTranslational machinery components 8052881 3000571 SCOP2 (2022-06-29)
CC [auth Bv]SCOP2 FamilyRibosomal protein L6e 8048637 4006169 SCOP2 (2022-06-29)
CC [auth Bv]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053104 3000334 SCOP2 (2022-06-29)
DC [auth Bw]SCOP2 FamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8050357 4006854 SCOP2 (2022-06-29)
DC [auth Bw]SCOP2 FamilyRibosomal protein L30p/L7e 8052933 4001360 SCOP2 (2022-06-29)
DC [auth Bw]SCOP2 SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052934 3002152 SCOP2 (2022-06-29)
DC [auth Bw]SCOP2 SuperfamilyRibosomal protein L30p/L7e 8052935 3001378 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth A0]TTL, ATPgrasp_YheCDe4v8mA01 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
B [auth A1]TTL, ATPgrasp_YheCDe4v8mA11 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
C [auth A2]TTL, ATPgrasp_YheCDe4v8mA21 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
D [auth A3]TTL, ATPgrasp_YheCDe4v8mA31 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
E [auth A4]TTL, ATPgrasp_YheCDe4v8mA41 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
F [auth A5]TTL, ATPgrasp_YheCDe4v8mA51 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
G [auth A6]KAsynt_C_assoce4v8mA61 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
H [auth A7]TTL, ATPgrasp_YheCDe4v8mA71 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
I [auth A8]TTL, ATPgrasp_YheCDe4v8mA81 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
J [auth A9]TTL, ATPgrasp_YheCDe4v8mA91 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
K [auth AC]FlaF_Ig-likee4v8mAC1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (v294.1)
L [auth AD]TTL, ATPgrasp_YheCDe4v8mAD1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
M [auth AE]Cellulasee4v8mAE1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (v294.1)
N [auth AF]TTL, ATPgrasp_YheCDe4v8mAF1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
O [auth AG]TTL, ATPgrasp_YheCDe4v8mAG1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
P [auth AH]TTL, ATPgrasp_YheCDe4v8mAH1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
Q [auth AI]Cellulasee4v8mAI1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (v294.1)
R [auth AJ]TTL, ATPgrasp_YheCDe4v8mAJ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
S [auth AK]Cellulasee4v8mAK1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (v294.1)
T [auth AL]KAsynt_C_assoce4v8mAL1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
U [auth AM]Cellulasee4v8mAM1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (v294.1)
V [auth AO]TTL, ATPgrasp_YheCDe4v8mAO1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
W [auth AP]TTL, ATPgrasp_YheCDe4v8mAP3 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
W [auth AP]KAsynt_C_assoce4v8mAP1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
X [auth AQ]TTL, ATPgrasp_YheCDe4v8mAQ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
Y [auth AR]Fer4, Fer4_7, Fer4_10e4v8mAR1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Aha1/BPI domain-likeF: Fer4, Fer4_7, Fer4_10ECOD (v294.1)
Z [auth AS]TTL, ATPgrasp_YheCDe4v8mAS1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
AA [auth AT]TTL, ATPgrasp_YheCDe4v8mAT1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
BA [auth AU]TTL, ATPgrasp_YheCDe4v8mAU1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
CA [auth AV]TTL, ATPgrasp_YheCDe4v8mAV1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
DA [auth AW]TTL, ATPgrasp_YheCDe4v8mAW1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
EA [auth AX]TTL, ATPgrasp_YheCDe4v8mAX1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
FA [auth AY]KAsynt_C_assoce4v8mAY1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
GA [auth AZ]TTL, ATPgrasp_YheCDe4v8mAZ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
PA [auth BI]TTL, ATPgrasp_YheCDe4v8mBI1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
QA [auth BJ]TTL, ATPgrasp_YheCDe4v8mBJ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
RA [auth BK]TTL, ATPgrasp_YheCDe4v8mBK1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
SA [auth BL]TTL, ATPgrasp_YheCDe4v8mBL1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
TA [auth BM]TTL, ATPgrasp_YheCDe4v8mBM1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
UA [auth BN]MG1e4v8mBN1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
VA [auth BO]TTL, ATPgrasp_YheCDe4v8mBO1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
WA [auth BP]KOW,Ribosomal_L14ee4v8mBP1 A: a/b three-layered sandwichesX: HTHH: SH3T: SH3F: KOW,Ribosomal_L14eECOD (v294.1)
XA [auth BQ]TTL, ATPgrasp_YheCDe4v8mBQ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
YA [auth BR]TTL, ATPgrasp_YheCDe4v8mBR1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
ZA [auth BS]TTL, ATPgrasp_YheCDe4v8mBS1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
AB [auth BT]TTL, ATPgrasp_YheCDe4v8mBT1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
BB [auth BU]TTL, ATPgrasp_YheCDe4v8mBU1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
CB [auth BV]KAsynt_C_assoce4v8mBV1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
DB [auth BW]TTL, ATPgrasp_YheCDe4v8mBW1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
EB [auth BX]TTL, ATPgrasp_YheCDe4v8mBX1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
FB [auth BY]TTL, ATPgrasp_YheCDe4v8mBY1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
GB [auth BZ]TTL, ATPgrasp_YheCDe4v8mBZ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
HB [auth Ba]TTL, ATPgrasp_YheCDe4v8mBa1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
IB [auth Bb]CE2_Ne4v8mBb1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: CE2_NECOD (v294.1)
JB [auth Bc]MG1e4v8mBc1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: MG1ECOD (v294.1)
KB [auth Bd]V_ATPase_Ie4v8mBd1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (v294.1)
LB [auth Be]TTL, ATPgrasp_YheCDe4v8mBe1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
MB [auth Bf]TTL, ATPgrasp_YheCDe4v8mBf1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
NB [auth Bg]TTL, ATPgrasp_YheCDe4v8mBg1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
OB [auth Bh]Ribosomal_L31ee4v8mBh1 A: a/b three-layered sandwichesX: CCHC-type 1 zinc fingerH: Ribosomal protein L31e/gp120 outer domainT: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (v294.1)
PB [auth Bi]TTL, ATPgrasp_YheCDe4v8mBi1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
QB [auth Bj]V_ATPase_Ie4v8mBj1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (v294.1)
RB [auth Bk]TTL, ATPgrasp_YheCDe4v8mBk1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
SB [auth Bl]TTL, ATPgrasp_YheCDe4v8mBl1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
TB [auth Bm]KAsynt_C_assoce4v8mBm1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (v294.1)
UB [auth Bn]TTL, ATPgrasp_YheCDe4v8mBn1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
VB [auth Bo]TTL, ATPgrasp_YheCDe4v8mBo1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
WB [auth Bp]V_ATPase_Ie4v8mBp1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (v294.1)
XB [auth Bq]TTL, ATPgrasp_YheCDe4v8mBq1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
YB [auth Br]TTL, ATPgrasp_YheCDe4v8mBr2 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
ZB [auth Bs]TTL, ATPgrasp_YheCDe4v8mBs1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
AC [auth Bt]TTL, ATPgrasp_YheCDe4v8mBt1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
BC [auth Bu]TTL, ATPgrasp_YheCDe4v8mBu1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
CC [auth Bv]FlaF_Ig-likee4v8mBv1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (v294.1)
DC [auth Bw]VipB_2e4v8mBw1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: DHS-like NAD/FAD-binding domainF: VipB_2ECOD (v294.1)
EC [auth Bx]TTL, ATPgrasp_YheCDe4v8mBx1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)
FC [auth By]TTL, ATPgrasp_YheCDe4v8mBy1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth A1]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
B [auth A1]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
B [auth A1]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
B [auth A1]PF00467KOW motif (KOW)KOW motif- Family
C [auth A2]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
D [auth A3]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
E [auth A4]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
F [auth A5]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
G [auth A6]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
G [auth A6]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
H [auth A7]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
J [auth A9]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
K [auth AC]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
L [auth AD]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
M [auth AE]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
M [auth AE]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
N [auth AF]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth AG]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
P [auth AH]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
Q [auth AI]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
R [auth AJ]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
S [auth AK]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
U [auth AM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
V [auth AO]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
W [auth AP]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
W [auth AP]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
Y [auth AR]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
Z [auth AS]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
AA [auth AT]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
DA [auth AW]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
EA [auth AX]PF07650KH domain (KH_2)KH domainDomain
EA [auth AX]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
FA [auth AY]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
GA [auth AZ]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
HA [auth BA]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
HA [auth BA]PF00467KOW motif (KOW)KOW motif- Family
IA [auth BB]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
JA [auth BC]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
KA [auth BD]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
LA [auth BE]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
NA [auth BG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OA [auth BH]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PA [auth BI]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
PA [auth BI]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
QA [auth BJ]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
RA [auth BK]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
SA [auth BL]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
SA [auth BL]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
SA [auth BL]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
TA [auth BM]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
TA [auth BM]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
TA [auth BM]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
UA [auth BN]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
UA [auth BN]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
VA [auth BO]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
VA [auth BO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
WA [auth BP]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
XA [auth BQ]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
XA [auth BQ]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
YA [auth BR]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
YA [auth BR]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
ZA [auth BS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
AB [auth BT]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
AB [auth BT]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AB [auth BT]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
BB [auth BU]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
CB [auth BV]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
CB [auth BV]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
DB [auth BW]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
DB [auth BW]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
DB [auth BW]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
EB [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
EB [auth BX]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FB [auth BY]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
FB [auth BY]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
GB [auth BZ]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
GB [auth BZ]PF00467KOW motif (KOW)KOW motif- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A0]40S RIBOSOMAL PROTEIN S3A, PUTATIVE
B [auth A1]40S RIBOSOMAL PROTEIN S4, PUTATIVE
C [auth A2]40S RIBOSOMAL PROTEIN S5, PUTATIVE
D [auth A3]40S RIBOSOMAL PROTEIN S6
E [auth A4]RIBOSOMAL PROTEIN S7, PUTATIVE
F [auth A5]40S RIBOSOMAL PROTEIN S8
G [auth A6]40S RIBOSOMAL PROTEIN S9, PUTATIVE
H [auth A7]GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN
I [auth A8]RIBOSOMAL PROTEIN S29, PUTATIVE---
J [auth A9]UBIQUITIN/RIBOSOMAL PROTEIN S27A, PUTATIVE
K [auth AC]40S RIBOSOMAL PROTEIN SA, PUTATIVE
L [auth AD]40S RIBOSOMAL PROTEIN S10, PUTATIVE
M [auth AE]40S RIBOSOMAL PROTEINS S11, PUTATIVE
N [auth AF]40S RIBOSOMAL PROTEIN S12
O [auth AG]40S RIBOSOMAL PROTEIN S13, PUTATIVE
P [auth AH]40S RIBOSOMAL PROTEIN S14
Q [auth AI]40S RIBOSOMAL PROTEIN S15, PUTATIVE
R [auth AJ]40S RIBOSOMAL PROTEIN S15A, PUTATIVE
S [auth AK]40S RIBOSOMAL PROTEIN S16, PUTATIVE
T [auth AL]40S RIBOSOMAL PROTEIN S17, PUTATIVE
U [auth AM]40S RIBOSOMAL PROTEIN S18, PUTATIVE
V [auth AO]RIBOSOMAL PROTEIN S19, PUTATIVE
W [auth AP]40S RIBOSOMAL PROTEIN S2, PUTATIVE
X [auth AQ]RIBOSOMAL PROTEIN S20, PUTATIVE---
Y [auth AR]40S RIBOSOMAL PROTEIN S21, PUTATIVE
Z [auth AS]40S RIBOSOMAL PROTEIN S23, PUTATIVE
AA [auth AT]40S RIBOSOMAL PROTEIN S24
BA [auth AU]40S RIBOSOMAL PROTEIN S25, PUTATIVE
CA [auth AV]RIBOSOMAL PROTEIN S26, PUTATIVE
DA [auth AW]40S RIBOSOMAL PROTEIN S27, PUTATIVE
EA [auth AX]40S RIBOSOMAL PROTEIN S3, PUTATIVE
FA [auth AY]40S RIBOSOMAL PROTEIN S30, PUTATIVE
GA [auth AZ]40S RIBOSOMAL PROTEIN S33, PUTATIVE
HA [auth BA]ALPHA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT 28S RRNA---
IA [auth BB]BETA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT 28S RRNA---
JA [auth BC]5.8S RRNA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT---
KA [auth BD]5S RRNA CHAIN OF THE LARGE RIBOSOMAL SUBUNIT---
LA [auth BE]SHORT RRNA-I OF THE LARGE RIBOSOMAL SUBUNIT---
MA [auth BF]SHORT RRNA-II OF THE LARGE RIBOSOMAL SUBUNIT---
NA [auth BG]SHORT RRNA-III OF THE LARGE RIBOSOMAL SUBUNIT---
OA [auth BH]SHORT RRNA-IV OF THE LARGE RIBOSOMAL SUBUNIT---
PA [auth BI]60S RIBOSOMAL PROTEIN L18
QA [auth BJ]RIBOSOMAL PROTEIN
RA [auth BK]60S RIBOSOMAL PROTEIN L10, PUTATIVE
SA [auth BL]60S RIBOSOMAL PROTEIN L11, PUTATIVE
TA [auth BM]60S RIBOSOMAL PROTEIN L12, PUTATIVE
UA [auth BN]60S RIBOSOMAL PROTEIN L13
VA [auth BO]60S RIBOSOMAL PROTEIN L13A, PUTATIVE
WA [auth BP]PROBABLE 60S RIBOSOMAL PROTEIN L14
XA [auth BQ]RIBOSOMAL PROTEIN L15
YA [auth BR]60S RIBOSOMAL PROTEIN L17, PUTATIVE
ZA [auth BS]60S RIBOSOMAL PROTEIN L18A
AB [auth BT]60S RIBOSOMAL PROTEIN L19, PUTATIVE
BB [auth BU]60S RIBOSOMAL PROTEIN L21E, PUTATIVE
CB [auth BV]60S RIBOSOMAL PROTEIN L22, PUTATIVE
DB [auth BW]60S RIBOSOMAL PROTEIN L23, PUTATIVE
EB [auth BX]60S RIBOSOMAL PROTEIN L23A
FB [auth BY]60S RIBOSOMAL PROTEIN L24, PUTATIVE
GB [auth BZ]60S RIBOSOMAL PROTEIN L26, PUTATIVE
HB [auth Ba]60S RIBOSOMAL PROTEIN L27, PUTATIVE
IB [auth Bb]60S RIBOSOMAL PROTEIN L27A
JB [auth Bc]60S RIBOSOMAL PROTEIN L28, PUTATIVE
KB [auth Bd]60S RIBOSOMAL PROTEIN L29, PUTATIVE
LB [auth Be]60S RIBOSOMAL PROTEIN L2, PUTATIVE
MB [auth Bf]RIBOSOMAL PROTEIN L3, MITOCHONDRIAL, PUTATIVE
NB [auth Bg]60S RIBOSOMAL PROTEIN L30 -
OB [auth Bh]60S RIBOSOMAL SUBUNIT PROTEIN L31, PUTATIVE
PB [auth Bi]60S RIBOSOMAL PROTEIN L32, PUTATIVE
QB [auth Bj]60S RIBOSOMAL PROTEIN L34, PUTATIVE
RB [auth Bk]60S RIBOSOMAL PROTEIN L35, PUTATIVE
SB [auth Bl]60S RIBOSOMAL PROTEIN L35A, PUTATIVE
TB [auth Bm]RIBOSOMAL PROTEIN L36, PUTATIVE
UB [auth Bn]RIBOSOMAL PROTEIN L37
VB [auth Bo]60S RIBOSOMAL PROTEIN L37A, PUTATIVE
WB [auth Bp]60S RIBOSOMAL PROTEIN L38, PUTATIVE
XB [auth Bq]60S RIBOSOMAL PROTEIN L39, PUTATIVE
YB [auth Br]60S RIBOSOMAL PROTEIN L4
ZB [auth Bs]UBIQUITIN-60S RIBOSOMAL PROTEIN L40
AC [auth Bt]60S RIBOSOMAL PROTEIN L44
BC [auth Bu]60S RIBOSOMAL PROTEIN L5, PUTATIVE
CC [auth Bv]60S RIBOSOMAL PROTEIN L6, PUTATIVE
DC [auth Bw]60S RIBOSOMAL PROTEIN L7, PUTATIVE
EC [auth Bx]60S RIBOSOMAL PROTEIN L7A, PUTATIVE
FC [auth By]60S RIBOSOMAL PROTEIN L9, PUTATIVE
GC [auth AA]18S RRNA OF THE SMALL RIBOSOMAL SUBUNIT---
HC [auth AB]E-SITE TRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth A0]IPR001593Small ribosomal subunit protein eS1Family
A [auth A0]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
B [auth A1]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
B [auth A1]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
B [auth A1]IPR002942RNA-binding S4 domainDomain
B [auth A1]IPR013845Small ribosomal subunit protein eS4, central regionDomain
B [auth A1]IPR000876Small ribosomal subunit protein eS4Family
B [auth A1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
B [auth A1]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
B [auth A1]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
B [auth A1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
B [auth A1]IPR005824KOWDomain
C [auth A2]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
C [auth A2]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
C [auth A2]IPR000235Small ribosomal subunit protein uS7Family
C [auth A2]IPR023798Small ribosomal subunit protein uS7 domainDomain
C [auth A2]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
D [auth A3]IPR014401Small ribosomal subunit protein eS6-likeFamily
D [auth A3]IPR001377Small ribosomal subunit protein eS6Family
D [auth A3]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
E [auth A4]IPR000554Small ribosomal subunit protein eS7Family
F [auth A5]IPR001047Small ribosomal subunit protein eS8Family
F [auth A5]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
F [auth A5]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
G [auth A6]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
G [auth A6]IPR002942RNA-binding S4 domainDomain
G [auth A6]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
G [auth A6]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
G [auth A6]IPR022801Small ribosomal subunit protein uS4Family
G [auth A6]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
H [auth A7]IPR019775WD40 repeat, conserved siteConserved Site
H [auth A7]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
H [auth A7]IPR045223Small ribosomal subunit protein RACK1-likeFamily
H [auth A7]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
H [auth A7]IPR001680WD40 repeatRepeat
H [auth A7]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
J [auth A9]IPR000626Ubiquitin-like domainDomain
J [auth A9]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
J [auth A9]IPR002906Small ribosomal subunit protein eS31Domain
J [auth A9]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
J [auth A9]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
K [auth AC]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
K [auth AC]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
K [auth AC]IPR001865Small ribosomal subunit protein uS2Family
K [auth AC]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
K [auth AC]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
L [auth AD]IPR037447Small ribosomal subunit protein eS10Family
L [auth AD]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
L [auth AD]IPR005326Plectin/eS10, N-terminalDomain
M [auth AE]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
M [auth AE]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth AE]IPR000266Small ribosomal subunit protein uS17Family
M [auth AE]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
M [auth AE]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
N [auth AF]IPR000530Small ribosomal subunit protein eS12Family
N [auth AF]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth AF]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
N [auth AF]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
O [auth AG]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
O [auth AG]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth AG]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
O [auth AG]IPR000589Small ribosomal subunit protein uS15Family
P [auth AH]IPR001971Small ribosomal subunit protein uS11Family
P [auth AH]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
P [auth AH]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
Q [auth AI]IPR002222Small ribosomal subunit protein uS19Family
Q [auth AI]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
Q [auth AI]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
Q [auth AI]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
R [auth AJ]IPR000630Small ribosomal subunit protein uS8Family
R [auth AJ]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
R [auth AJ]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
S [auth AK]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
S [auth AK]IPR000754Small ribosomal subunit protein uS9Family
S [auth AK]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
T [auth AL]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
T [auth AL]IPR001210Small ribosomal subunit protein eS17Family
U [auth AM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
U [auth AM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
U [auth AM]IPR001892Small ribosomal subunit protein uS13Family
U [auth AM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
V [auth AO]IPR001266Small ribosomal subunit protein eS19Family
V [auth AO]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth AO]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
W [auth AP]IPR000851Small ribosomal subunit protein uS5Family
W [auth AP]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
W [auth AP]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
W [auth AP]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
W [auth AP]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
W [auth AP]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
W [auth AP]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Y [auth AR]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Y [auth AR]IPR001931Small ribosomal subunit protein eS21Family
Z [auth AS]IPR006032Small ribosomal subunit protein uS12Family
Z [auth AS]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth AS]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
AA [auth AT]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
AA [auth AT]IPR001976Small ribosomal subunit protein eS24Family
AA [auth AT]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth AT]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
BA [auth AU]IPR004977Small ribosomal subunit protein eS25Family
CA [auth AV]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
CA [auth AV]IPR000892Small ribosomal subunit protein eS26Family
CA [auth AV]IPR047864Ribosomal protein eS26, conserved siteConserved Site
DA [auth AW]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
DA [auth AW]IPR000592Small ribosomal subunit protein eS27Family
DA [auth AW]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth AX]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
EA [auth AX]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
EA [auth AX]IPR057258Small ribosomal subunit protein uS3Family
EA [auth AX]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
EA [auth AX]IPR004044K Homology domain, type 2Domain
EA [auth AX]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
EA [auth AX]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
FA [auth AY]IPR006846Small ribosomal subunit protein eS30Family
GA [auth AZ]IPR028626Ribosomal protein eS28 conserved siteConserved Site
GA [auth AZ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GA [auth AZ]IPR000289Small ribosomal subunit protein eS28Family
PA [auth BI]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PA [auth BI]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
PA [auth BI]IPR000039Large ribosomal subunit protein eL18Family
PA [auth BI]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth BJ]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
QA [auth BJ]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
QA [auth BJ]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
QA [auth BJ]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
QA [auth BJ]IPR002143Large ribosomal subunit protein uL1Family
QA [auth BJ]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
RA [auth BK]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
RA [auth BK]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
RA [auth BK]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
RA [auth BK]IPR016180Large ribosomal subunit protein uL16 domainDomain
RA [auth BK]IPR047873Large ribosomal subunit protein uL16Family
SA [auth BL]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
SA [auth BL]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
SA [auth BL]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
SA [auth BL]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
SA [auth BL]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
SA [auth BL]IPR002132Large ribosomal subunit protein uL5Family
TA [auth BM]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
TA [auth BM]IPR000911Ribosomal protein uL11Family
TA [auth BM]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
TA [auth BM]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
TA [auth BM]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
UA [auth BN]IPR001380Large ribosomal subunit protein eL13Family
UA [auth BN]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
VA [auth BO]IPR005822Large ribosomal subunit protein uL13Family
VA [auth BO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
VA [auth BO]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
WA [auth BP]IPR039660Large ribosomal subunit protein eL14Family
WA [auth BP]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
WA [auth BP]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth BP]IPR002784Large ribosomal subunit protein eL14 domainDomain
WA [auth BP]IPR005824KOWDomain
WA [auth BP]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth BQ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth BQ]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
XA [auth BQ]IPR000439Large ribosomal subunit protein eL15Family
YA [auth BR]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
YA [auth BR]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
YA [auth BR]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
YA [auth BR]IPR001063Large ribosomal subunit protein uL22Family
ZA [auth BS]IPR028877Large ribosomal subunit protein eL20Family
ZA [auth BS]IPR023573Large ribosomal subunit protein eL20 domainDomain
ZA [auth BS]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
AB [auth BT]IPR039547Large ribosomal subunit protein eL19Family
AB [auth BT]IPR057260Ribosomal protein L19e, C-terminal domainDomain
AB [auth BT]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
AB [auth BT]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
AB [auth BT]IPR057259Ribosomal protein L19e, N-terminal domainDomain
AB [auth BT]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
AB [auth BT]IPR000196Large ribosomal subunit protein eL19 domainDomain
BB [auth BU]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
BB [auth BU]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
BB [auth BU]IPR001147Large ribosomal subunit protein eL21Family
BB [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CB [auth BV]IPR002671Large ribosomal subunit protein eL22Family
CB [auth BV]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
DB [auth BW]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
DB [auth BW]IPR000218Large ribosomal subunit protein uL14Family
DB [auth BW]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
EB [auth BX]IPR019985Large ribosomal subunit protein uL23Family
EB [auth BX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
EB [auth BX]IPR013025Large ribosomal subunit protein uL23-likeFamily
EB [auth BX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EB [auth BX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
FB [auth BY]IPR056366Large ribosomal subunit protein eL24Family
FB [auth BY]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
FB [auth BY]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
GB [auth BZ]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
GB [auth BZ]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
GB [auth BZ]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
GB [auth BZ]IPR005824KOWDomain
GB [auth BZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HB [auth Ba]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
HB [auth Ba]IPR005824KOWDomain
HB [auth Ba]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HB [auth Ba]IPR001141Large ribosomal subunit protein eL27Family
HB [auth Ba]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
IB [auth Bb]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IB [auth Bb]IPR030878Large ribosomal subunit protein uL15Family
IB [auth Bb]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JB [auth Bc]IPR029004Ribosomal eL28/Mak16Domain
JB [auth Bc]IPR002672Large ribosomal subunit protein eL28Family
KB [auth Bd]IPR002673Large ribosomal subunit protein eL29Family
LB [auth Be]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
LB [auth Be]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
LB [auth Be]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LB [auth Be]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth Be]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
LB [auth Be]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
LB [auth Be]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
LB [auth Be]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
LB [auth Be]IPR002171Large ribosomal subunit protein uL2Family
MB [auth Bf]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
MB [auth Bf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
MB [auth Bf]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
MB [auth Bf]IPR000597Large ribosomal subunit protein uL3Family
MB [auth Bf]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
NB [auth Bg]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
NB [auth Bg]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
NB [auth Bg]IPR039109Large ribosomal subunit protein eL30-likeFamily
NB [auth Bg]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
OB [auth Bh]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OB [auth Bh]IPR000054Large ribosomal subunit protein eL31Family
PB [auth Bi]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
PB [auth Bi]IPR001515Large ribosomal subunit protein eL32Family
QB [auth Bj]IPR008195Large ribosomal subunit protein eL34Family
QB [auth Bj]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
RB [auth Bk]IPR001854Large ribosomal subunit protein uL29Family
RB [auth Bk]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
RB [auth Bk]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
SB [auth Bl]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
SB [auth Bl]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SB [auth Bl]IPR001780Large ribosomal subunit protein eL33Family
TB [auth Bm]IPR000509Large ribosomal subunit protein eL36Family
TB [auth Bm]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
UB [auth Bn]IPR001569Large ribosomal subunit protein eL37Family
UB [auth Bn]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
UB [auth Bn]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB [auth Bn]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
VB [auth Bo]IPR002674Large ribosomal subunit protein eL43Family
VB [auth Bo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VB [auth Bo]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
VB [auth Bo]IPR050522Eukaryotic ribosomal protein eL43Family
WB [auth Bp]IPR002675Large ribosomal subunit protein eL38Family
WB [auth Bp]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
XB [auth Bq]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
XB [auth Bq]IPR000077Large ribosomal subunit protein eL39Family
XB [auth Bq]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
YB [auth Br]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
YB [auth Br]IPR002136Large ribosomal subunit protein uL4Family
YB [auth Br]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
YB [auth Br]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
YB [auth Br]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
ZB [auth Bs]IPR019954Ubiquitin conserved siteConserved Site
ZB [auth Bs]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
ZB [auth Bs]IPR000626Ubiquitin-like domainDomain
ZB [auth Bs]IPR019956Ubiquitin domainDomain
ZB [auth Bs]IPR050158Ubiquitin and ubiquitin-likeFamily
ZB [auth Bs]IPR001975Large ribosomal subunit protein eL40 domainDomain
ZB [auth Bs]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
ZB [auth Bs]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Bt]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
AC [auth Bt]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Bt]IPR000552Large ribosomal subunit protein eL42Family
BC [auth Bu]IPR057268Large ribosomal subunit protein uL18Family
BC [auth Bu]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
BC [auth Bu]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
CC [auth Bv]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CC [auth Bv]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
CC [auth Bv]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CC [auth Bv]IPR000915Large ribosomal subunit protein eL6Family
DC [auth Bw]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
DC [auth Bw]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
DC [auth Bw]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
DC [auth Bw]IPR039699Large ribosomal subunit protein uL30Family
DC [auth Bw]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
DC [auth Bw]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
DC [auth Bw]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
EC [auth Bx]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
EC [auth Bx]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EC [auth Bx]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EC [auth Bx]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
EC [auth Bx]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
FC [auth By]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
FC [auth By]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
FC [auth By]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
FC [auth By]IPR000702Large ribosomal subunit protein uL6-likeFamily