4QUS

1.28 Angstrom resolution crystal structure of predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) from Escherichia coli str. K-12 substr. MG1655


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.28 Å
  • R-Value Free: 0.139 
  • R-Value Work: 0.109 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

1.28 Angstrom resolution crystal structure of predicted acyltransferase with acyl-CoA N-acyltransferase domain (ypeA) from Escherichia coli str. K-12 substr. MG1655

Halavaty, A.S.Filippova, E.V.Minasov, G.Flores, K.J.Dubrovska, I.Shuvalova, L.Anderson, W.F.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Acetyltransferase YpeA
A, B
149Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: ypeA
EC: 2.3.1.-
Find proteins for P76539 (Escherichia coli (strain K12))
Go to UniProtKB:  P76539
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A, B
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 90.817α = 90.00
b = 90.817β = 90.00
c = 84.167γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
HKL-3000data reduction
Blu-Icedata collection
PHASERphasing
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-23
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Refinement description