Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92
Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidoglycan-associated lipoprotein | 131 | Yersinia pestis CO92 | Mutation(s): 0  Gene Names: excC, pal, y3054, YPO1125, YP_1031 | ||
UniProt | |||||
Find proteins for A0A2U2GZX0 (Yersinia pestis) Explore A0A2U2GZX0  Go to UniProtKB:  A0A2U2GZX0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A2U2GZX0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
POP Query on POP | G [auth C] | PYROPHOSPHATE 2- H2 O7 P2 XPPKVPWEQAFLFU-UHFFFAOYSA-L | |||
SO4 Query on SO4 | D [auth A], E [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
FMT Query on FMT | F [auth C], H [auth C] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 65.015 | α = 90 |
b = 65.015 | β = 90 |
c = 86.967 | γ = 120 |
Software Name | Purpose |
---|---|
SBC-Collect | data collection |
HKL-3000 | data collection |
HKL-3000 | phasing |
MOLREP | phasing |
ARP/wARP | model building |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |